Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G275500.1 | Wheat | nucleus | 96.21 | 96.97 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 95.88 | 96.52 |
| Os05t0425000-00 | Rice | nucleus | 72.83 | 73.9 |
| EES19545 | Sorghum | nucleus | 73.05 | 72.73 |
| Zm00001d038223_P001 | Maize | cytosol | 72.05 | 71.33 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 37.64 | 49.27 |
| VIT_07s0031g02650.t01 | Wine grape | cytosol | 17.15 | 43.63 |
| PGSC0003DMT400045246 | Potato | mitochondrion | 12.36 | 42.53 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 34.63 | 39.87 |
| KRH64648 | Soybean | cytosol | 36.3 | 38.95 |
| KRH53256 | Soybean | cytosol | 36.41 | 38.84 |
| CDY04672 | Canola | nucleus | 34.52 | 35.55 |
| CDY08177 | Canola | nucleus | 34.86 | 35.13 |
| Bra015667.1-P | Field mustard | nucleus | 32.63 | 35.09 |
| Bra017947.1-P | Field mustard | nucleus | 35.52 | 34.79 |
| CDX88372 | Canola | nucleus | 31.96 | 34.75 |
| AT1G21740.1 | Thale cress | cytosol | 36.3 | 34.21 |
| CDY41788 | Canola | nucleus | 32.29 | 34.04 |
| AT1G77500.1 | Thale cress | nucleus | 33.18 | 33.9 |
| Solyc06g060270.2.1 | Tomato | nucleus | 35.08 | 31.07 |
| TraesCS3D01G509700.1 | Wheat | plastid | 30.51 | 29.78 |
| CDX87516 | Canola | nucleus | 14.59 | 29.11 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 23.83 | 28.05 |
| TraesCS5D01G340500.1 | Wheat | plastid | 23.05 | 28.01 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 23.27 | 27.54 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 23.72 | 26.3 |
| CDY42454 | Canola | cytosol | 19.71 | 25.25 |
| CDY18335 | Canola | cytosol | 19.71 | 25.04 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 26.84 | 25.0 |
| Bra002985.1-P | Field mustard | nucleus | 20.04 | 24.86 |
| AT5G54480.1 | Thale cress | nucleus | 19.38 | 24.17 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 15.59 | 22.12 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 13.59 | 21.71 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 15.81 | 21.35 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 16.59 | 21.32 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 17.04 | 20.82 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 16.37 | 19.07 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 19.15 | 19.01 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 14.81 | 18.71 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 13.47 | 17.87 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 16.15 | 17.84 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 15.59 | 17.28 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 13.36 | 16.51 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G265000.1 | EnsemblPlantsGene:TraesCS1D01G265000 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:-:360883772..360887952
Molecular Weight (calculated)
99034.3 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.568
Length
898 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCRSSRLDA ADVSPVAALC RERRDLMLAA GDRRAALAAA HAAYFRALPR VADALARFAH EHHAASPPGS PVLTLPPSDH DEPKKPSASS STPHTDSGHS
101: HLHFHSDASD SDPDSADDCA CDAPGHGHDA RGGVSGRGEI PPPNGVPQQR HIPEPAAARP AMPWQGRPAM PWGGRPEMPW GGMPQMPWDG RPEMPWAQAS
201: YDAYPSSFPI PEVAIPNAYY MKASSAAANT VYQEPYGYSN FATNVPSYMG YEYGYNNPMY GVPEGGQPAE HRGREAAAPA PAPPPPMPMP EASPWDFFNP
301: FDSYNQDLPH YNQKAFAPDG SFSSSPNSSE VREREGIPEL EEETEHESSM RESLKAGKAV ESTASNRIDN VDVSAKVKVS MEHTECEIDS VLSASVLESG
401: EGSVCSCDSD NANAGGGGAA LAGDDPAKVK RVSSEEHSSM VVGENAPLPS FGTRDVAEVV EEIKEQFNSA VACGDDVARI LEVGSIRYRP RSRILKLIVS
501: RMMGTFALLF SEPPVKNAEQ SAIGASSGTQ NSSKRIDSTS GVEINTLSSI MDRLYVWEKR LHKEIMEEEK LRITYDKEWK RLKELDESGA EPYKIDSTRA
601: SIRTLLTRIN IAIRSAKVIS RRIHILRDDE LHPHLVKLIQ GHVRMWKFIL ECHRKQFHSI LETKSHILIP KNGPERNSSK VTLELEMELL NWCSCFRNWI
701: ISQKAYIETL NGWLLKWLPR EKEETSDGIA PFSPGRLGAP GVFITANDWC QTMKRIPEGA VVDAMEAFAV NVHILWERQD EAHQQKMKTE YLSRDFSKRL
801: KSHQKDQVLP GHPKAGKAVL PDGDNGRAVD SRMVALDALH TRLDEQRARH EETVREIQES SATDLKAGLA PIFEALESFT QETLKGYENV RVPDSGMV
101: HLHFHSDASD SDPDSADDCA CDAPGHGHDA RGGVSGRGEI PPPNGVPQQR HIPEPAAARP AMPWQGRPAM PWGGRPEMPW GGMPQMPWDG RPEMPWAQAS
201: YDAYPSSFPI PEVAIPNAYY MKASSAAANT VYQEPYGYSN FATNVPSYMG YEYGYNNPMY GVPEGGQPAE HRGREAAAPA PAPPPPMPMP EASPWDFFNP
301: FDSYNQDLPH YNQKAFAPDG SFSSSPNSSE VREREGIPEL EEETEHESSM RESLKAGKAV ESTASNRIDN VDVSAKVKVS MEHTECEIDS VLSASVLESG
401: EGSVCSCDSD NANAGGGGAA LAGDDPAKVK RVSSEEHSSM VVGENAPLPS FGTRDVAEVV EEIKEQFNSA VACGDDVARI LEVGSIRYRP RSRILKLIVS
501: RMMGTFALLF SEPPVKNAEQ SAIGASSGTQ NSSKRIDSTS GVEINTLSSI MDRLYVWEKR LHKEIMEEEK LRITYDKEWK RLKELDESGA EPYKIDSTRA
601: SIRTLLTRIN IAIRSAKVIS RRIHILRDDE LHPHLVKLIQ GHVRMWKFIL ECHRKQFHSI LETKSHILIP KNGPERNSSK VTLELEMELL NWCSCFRNWI
701: ISQKAYIETL NGWLLKWLPR EKEETSDGIA PFSPGRLGAP GVFITANDWC QTMKRIPEGA VVDAMEAFAV NVHILWERQD EAHQQKMKTE YLSRDFSKRL
801: KSHQKDQVLP GHPKAGKAVL PDGDNGRAVD SRMVALDALH TRLDEQRARH EETVREIQES SATDLKAGLA PIFEALESFT QETLKGYENV RVPDSGMV
001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.