CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015667.1-P	Field mustard	nucleus	96.44	51.98
CDX88372	Canola	nucleus	94.89	51.69
CDY41788	Canola	nucleus	89.11	47.07
AT1G77500.1	Thale cress	nucleus	67.33	34.47
CDY04672	Canola	nucleus	56.67	29.24
CDY08177	Canola	nucleus	57.33	28.96
CDY28161	Canola	nucleus	12.89	28.29
VIT_18s0001g02480.t01	Wine grape	nucleus	42.0	24.23
KRH64648	Soybean	cytosol	40.44	21.74
KRH53256	Soybean	cytosol	40.0	21.38
GSMUA_Achr3P22040_001	Banana	cytosol	27.33	17.93
Solyc06g060270.2.1	Tomato	nucleus	38.67	17.16
GSMUA_Achr9P08510_001	Banana	nucleus	28.0	16.11
GSMUA_Achr3P19020_001	Banana	cytosol	28.67	15.64
CDX88008	Canola	nucleus	23.78	14.96
CDY17530	Canola	cytosol	23.56	14.93
TraesCS1A01G264800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	29.11	14.69
CDY07877	Canola	cytosol	23.33	14.69
TraesCS1D01G265000.1	Wheat	nucleus	29.11	14.59
CDX76322	Canola	cytosol	22.89	14.57
TraesCS1B01G275500.1	Wheat	nucleus	28.67	14.48
CDY18335	Canola	cytosol	22.22	14.14
Os05t0425000-00	Rice	nucleus	27.78	14.12
CDX69122	Canola	nucleus	23.11	13.85
CDY42454	Canola	cytosol	21.33	13.69
Zm00001d038223_P001	Maize	cytosol	27.11	13.45
EES19545	Sorghum	nucleus	26.67	13.3
CDX75484	Canola	cytosol, plastid	20.22	13.06
KXG34164	Sorghum	plastid	25.56	12.39
TraesCS3D01G509700.1	Wheat	plastid	25.33	12.39
TraesCS3B01G566500.1	Wheat	plastid	25.56	12.25
Zm00001d011823_P002	Maize	plastid	24.22	12.14
CDY31475	Canola	nucleus	16.22	12.13
CDX68628	Canola	nucleus	16.22	10.8
CDY39136	Canola	nucleus	18.0	10.76
CDX82615	Canola	nucleus	17.78	10.61
TraesCS3A01G503100.1	Wheat	cytosol	16.22	9.86
HORVU3Hr1G110830.5	Barley	cytosol, nucleus	14.44	9.35
CDX84637	Canola	cytosol	13.78	9.24
CDY04477	Canola	nucleus	14.44	9.04
CDX79570	Canola	cytosol	13.78	9.0
CDY42005	Canola	nucleus	12.0	8.82
CDX71474	Canola	nucleus	14.0	8.76
CDX69386	Canola	nucleus	11.33	8.44
CDX73734	Canola	nucleus	12.0	8.44
CDX77992	Canola	nucleus	11.78	8.43
CDX83412	Canola	nucleus	12.44	8.32
CDX80528	Canola	nucleus	12.44	7.64
CDX88193	Canola	nucleus	12.44	7.6
CDY42691	Canola	nucleus	11.56	7.19
CDX71821	Canola	nucleus	11.11	7.04
CDY56992	Canola	nucleus	11.33	7.02
CDY41178	Canola	nucleus	10.89	6.8
CDY52975	Canola	nucleus	10.89	6.56
CDX95620	Canola	nucleus	10.0	6.47
CDY61085	Canola	nucleus	10.67	6.43
CDY29526	Canola	peroxisome	15.78	6.18
CDX87081	Canola	nucleus	7.11	5.99
CDY28162	Canola	cytosol	2.44	2.72
CDY66508	Canola	cytosol, nucleus	2.44	2.6
PGSC0003DMT400045246	Potato	mitochondrion	0.89	1.53
Os01t0960200-00	Rice	nucleus	0.67	1.12

Protein Annotations

EnsemblPlants:CDX87516	EnsemblPlantsGene:GSBRNA2T00146508001	InterPro:DUF630	InterPro:DUF632	PANTHER:PTHR21450	PANTHER:PTHR21450:SF8
PFAM:PF04782	PFAM:PF04783	ProteinID:CDX87516	ProteinID:CDX87516.1	SEG:seg	UniParc:UPI0004EE6B1F
MapMan:35.2	:	:	:	:	:

Description

BnaA07g33570D

Coordinates

chrLK031850:-:1007593..1008993

Molecular Weight (calculated)

49242.1 Da

IEP (calculated)

4.838

GRAVY (calculated)

-0.622

Length

450 amino acids

Sequence
(BLAST)

001: MGCGGSKIDD QQLVILCRER KDLIKTASHH RTALAVAHLV YLQSLRDVGE AIQRFVDEES VVSSSAVLTL PSDEGKPKKR KGSISSTSIS HSVIEEEEDG
101: EDGSHLNLSS GSESGLEDDD HIQIDTTPEP DLNRSKQTFS PGYPPPGYPT GYAPPGYPYP YPVGGWGFNP NPNQGMYYMK KSSTPSQPFV FKPENHRVEP
201: SDPGYFINPG ITGSAKPPPA LPSPPRASTW DFLNVFDTYD YGNARSRAAP SYLASISSSP DSKEVREREG IPELEEVSEH EVIKQVYRQR PKRTTPLKKV
301: KETVPLPEEL ATDSETVSTF SGSDVESDFH YVKSSNSSSG QETIVETESY GNKKGVSLEL EEEASTSSSS FDVESSSKMS SFTSLSIRGT REIKGVVEEI
401: KSEFEIASSC GKEVAMLLEV SKLPYQHKDK GGFKGNLVLT IHACLSELLI

Best Arabidopsis Sequence Match ( AT1G77500.1 )
(BLAST)

001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS

Arabidopsis Description

DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9CAQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.