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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0960200-00 Rice nucleus 37.16 36.19
Solyc06g060270.2.1 Tomato nucleus 96.93 24.95
VIT_18s0001g02480.t01 Wine grape nucleus 65.13 21.79
KRH64648 Soybean cytosol 61.69 19.24
KRH53256 Soybean cytosol 60.15 18.65
CDY04672 Canola nucleus 60.92 18.23
Bra017947.1-P Field mustard nucleus 63.98 18.21
CDY08177 Canola nucleus 60.92 17.85
GSMUA_Achr3P22040_001 Banana cytosol 46.36 17.64
AT1G21740.1 Thale cress cytosol 63.6 17.42
AT1G77500.1 Thale cress nucleus 53.64 15.93
CDX88372 Canola nucleus 48.66 15.38
PGSC0003DMT400009224 Potato nucleus 22.99 15.19
CDY41788 Canola nucleus 49.43 15.14
Bra015667.1-P Field mustard nucleus 48.28 15.09
GSMUA_Achr9P08510_001 Banana nucleus 42.91 14.32
Zm00001d038223_P001 Maize cytosol 45.21 13.01
Os05t0425000-00 Rice nucleus 43.3 12.77
EES19545 Sorghum nucleus 44.06 12.75
TraesCS1D01G265000.1 Wheat nucleus 42.53 12.36
TraesCS1B01G275500.1 Wheat nucleus 42.15 12.35
TraesCS1A01G264800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 42.15 12.33
PGSC0003DMT400043330 Potato mitochondrion 37.93 12.27
HORVU3Hr1G110830.5 Barley cytosol, nucleus 32.57 12.23
TraesCS3A01G503100.1 Wheat cytosol 34.48 12.16
GSMUA_Achr3P19020_001 Banana cytosol 36.78 11.64
PGSC0003DMT400048013 Potato nucleus 37.93 10.84
TraesCS3D01G509700.1 Wheat plastid 34.48 9.78
Zm00001d011823_P002 Maize plastid 33.33 9.69
TraesCS3B01G566500.1 Wheat plastid 34.48 9.58
KXG34164 Sorghum plastid 33.72 9.48
PGSC0003DMT400046483 Potato cytosol 25.67 9.1
PGSC0003DMT400037619 Potato plastid 21.46 8.67
PGSC0003DMT400015690 Potato nucleus 22.22 7.59
PGSC0003DMT400066867 Potato nucleus 23.37 7.16
PGSC0003DMT400053154 Potato nucleus 18.39 6.69
PGSC0003DMT400005111 Potato nucleus 16.48 5.59
CDX87516 Canola nucleus 1.53 0.89
Protein Annotations
EnsemblPlants:PGSC0003DMT400045246EnsemblPlantsGene:PGSC0003DMG402017555InterPro:DUF632ncoils:CoilPANTHER:PTHR21450PANTHER:PTHR21450:SF8
PFAM:PF04782PGSC:PGSC0003DMG402017555UniParc:UPI00029602F1UniProt:M1BHC7MapMan:35.2:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402017555]
Coordinates
chr6:+:43180124..43180909
Molecular Weight (calculated)
30064.9 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.608
Length
261 amino acids
Sequence
(BLAST)
001: MWRSMLNCHQ KQFQAVMESK TRALRANTGF QRDSSLRATL ELEVQLLSWC SHFNDWICCQ KSYVESLKGW LLRCLMYEPE ETPDGPVPFS PGRLGAPPVF
101: VICNDWSQAV EAISENRVAI AMNDFASNLR QLWERQDEEQ RQRIKAEYLS KDYKKRLTML QQKRGGLRHE QDTMSNRSHI ITPSEKGISP LDDLKVDLDS
201: FKKKLVEERT KHKDAIKLVH DAASSSLQGG LLPIFKALEN FTSEALRAHE QVRLQSVRDG S
Best Arabidopsis Sequence Match ( AT1G21740.1 )
(BLAST)
001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.