Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88372 | Canola | nucleus | 88.15 | 90.92 |
| CDX87516 | Canola | nucleus | 47.07 | 89.11 |
| AT1G77500.1 | Thale cress | nucleus | 73.47 | 71.22 |
| CDY04672 | Canola | nucleus | 63.5 | 62.04 |
| CDY08177 | Canola | nucleus | 64.08 | 61.28 |
| PGSC0003DMT400045246 | Potato | mitochondrion | 15.14 | 49.43 |
| KRH64648 | Soybean | cytosol | 46.71 | 47.55 |
| KRH53256 | Soybean | cytosol | 46.48 | 47.03 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 42.25 | 46.15 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 34.39 | 42.71 |
| Solyc06g060270.2.1 | Tomato | nucleus | 45.42 | 38.17 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 34.15 | 37.21 |
| CDX76322 | Canola | cytosol | 29.11 | 35.08 |
| CDY17530 | Canola | cytosol | 29.11 | 34.93 |
| CDY07877 | Canola | cytosol | 29.23 | 34.83 |
| CDX88008 | Canola | nucleus | 29.23 | 34.83 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 32.86 | 33.94 |
| CDX75484 | Canola | cytosol, plastid | 27.46 | 33.57 |
| CDX69122 | Canola | nucleus | 29.34 | 33.29 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 34.04 | 32.51 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 34.04 | 32.29 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 33.57 | 32.1 |
| EES19545 | Sorghum | nucleus | 33.22 | 31.37 |
| Os01t0960200-00 | Rice | nucleus | 9.86 | 31.34 |
| Zm00001d038223_P001 | Maize | cytosol | 33.1 | 31.09 |
| Os05t0425000-00 | Rice | nucleus | 32.04 | 30.85 |
| CDY18335 | Canola | cytosol | 24.88 | 29.99 |
| CDY42454 | Canola | cytosol | 24.3 | 29.53 |
| CDY28161 | Canola | nucleus | 7.04 | 29.27 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 25.12 | 28.92 |
| CDY31475 | Canola | nucleus | 20.19 | 28.57 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 23.12 | 28.35 |
| Zm00001d011823_P002 | Maize | plastid | 28.76 | 27.28 |
| TraesCS3D01G509700.1 | Wheat | plastid | 29.46 | 27.28 |
| TraesCS3B01G566500.1 | Wheat | plastid | 29.69 | 26.94 |
| KXG34164 | Sorghum | plastid | 29.34 | 26.94 |
| CDY28162 | Canola | cytosol | 12.32 | 25.99 |
| CDY66508 | Canola | cytosol, nucleus | 12.79 | 25.77 |
| CDX69386 | Canola | nucleus | 17.84 | 25.17 |
| CDY42005 | Canola | nucleus | 17.84 | 24.84 |
| CDX68628 | Canola | nucleus | 19.37 | 24.41 |
| CDX77992 | Canola | nucleus | 17.14 | 23.21 |
| CDY39136 | Canola | nucleus | 20.31 | 22.97 |
| CDX73734 | Canola | nucleus | 17.25 | 22.97 |
| CDX82615 | Canola | nucleus | 20.19 | 22.81 |
| CDX84637 | Canola | cytosol | 17.49 | 22.21 |
| CDX79570 | Canola | cytosol | 17.72 | 21.92 |
| CDY04477 | Canola | nucleus | 18.43 | 21.84 |
| CDX87081 | Canola | nucleus | 13.62 | 21.72 |
| CDX71474 | Canola | nucleus | 18.31 | 21.7 |
| CDX83412 | Canola | nucleus | 17.14 | 21.69 |
| CDX71821 | Canola | nucleus | 17.25 | 20.7 |
| CDY41178 | Canola | nucleus | 17.25 | 20.39 |
| CDY42691 | Canola | nucleus | 17.14 | 20.19 |
| CDY56992 | Canola | nucleus | 16.9 | 19.81 |
| CDX95620 | Canola | nucleus | 15.96 | 19.57 |
| CDX80528 | Canola | nucleus | 16.31 | 18.96 |
| CDX88193 | Canola | nucleus | 16.31 | 18.86 |
| CDY61085 | Canola | nucleus | 14.79 | 16.89 |
| CDY52975 | Canola | nucleus | 14.79 | 16.87 |
| CDY29526 | Canola | peroxisome | 19.95 | 14.8 |
Protein Annotations
| EnsemblPlants:CDY41788 | EnsemblPlantsGene:GSBRNA2T00073669001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY41788 | ProteinID:CDY41788.1 | SEG:seg |
| UniParc:UPI0004EE002D | UniProt:A0A078HYH2 | MapMan:35.1 | : | : | : |
Description
BnaC02g13680DBnaC02g13680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYH2]
Coordinates
chrLK032506:+:189141..193796
Molecular Weight (calculated)
95466.3 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.662
Length
852 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGGSKIDE QQLVILCRER KELIKTASHH RSALAVAHLV YLQSLRDVGE AIQRFVDEEN VVNSSSSSSV VLTLPSDEGK PKKRKGSISS TSISHSVIEE
101: GEEEEEDGDG SHLNLSSGSE SGLDDDDHHH IQIDTTPEPE LNRSKQTFSP GYPTDYPPSG YPTSYPPPGY PYPYPVGGWG FSGENPNPNQ GKYFMKKSAA
201: QSQPFVFKPE NHHRVEPSGP GYFINPGPTG SAKPPPPALP SPPRVSTWDF LNVFDTYDYG NARSRAAPSY YPPGMGSISS SPDSKEVRER EGIPELEEVP
301: EHEVIKQVYR RPKRTPPLKK VKEHKETVPL PEEVATESSL DSETVSTFSG SDVESDFHYV KSSNSSSGQE TIVETEEGSE QQVYGIKKGV VSFELEEEAS
401: SSSFDVESSM ISSFSSLSIR ETREIKEVVE EIKSEFEIAA SCGKEVAVLL EVSKLPYQHK DKGGFKVILS RIMYLVAPST RSKPELSIRL TSRTIQMAKA
501: YNGQDVDVGF TGNLSSTLEK LYAWEKKLYK EVKGEEKLRS IYEEKCKSLK KMDTHGAEAT KIEATRAYIK KLLMKIDISI RSVDSISKRI HKLRDEELQP
601: QLTQLIHGLV RMWRAMLKCH QKQFQAIMES KVRSVKANTV SSSKAFLDLE MELRDWCISF NEWVNTQKKY VHFLNQWLSK CLHYEPEATE DGYAPFSPSQ
701: IGAPPIFSIC KDWQEAMKRV SGEKVSNAMQ SFASSLHELW EKQEEEEQRV RAAAEMEFRD HGEYDKRSVV SKGRSESGVS VLDDLKVDLD SMRKKLVEER
801: GKRKETTVKV ASSSSSTLKG GLAPIFDALR KFNVEVVKAH GIVRLQRPQT SS
101: GEEEEEDGDG SHLNLSSGSE SGLDDDDHHH IQIDTTPEPE LNRSKQTFSP GYPTDYPPSG YPTSYPPPGY PYPYPVGGWG FSGENPNPNQ GKYFMKKSAA
201: QSQPFVFKPE NHHRVEPSGP GYFINPGPTG SAKPPPPALP SPPRVSTWDF LNVFDTYDYG NARSRAAPSY YPPGMGSISS SPDSKEVRER EGIPELEEVP
301: EHEVIKQVYR RPKRTPPLKK VKEHKETVPL PEEVATESSL DSETVSTFSG SDVESDFHYV KSSNSSSGQE TIVETEEGSE QQVYGIKKGV VSFELEEEAS
401: SSSFDVESSM ISSFSSLSIR ETREIKEVVE EIKSEFEIAA SCGKEVAVLL EVSKLPYQHK DKGGFKVILS RIMYLVAPST RSKPELSIRL TSRTIQMAKA
501: YNGQDVDVGF TGNLSSTLEK LYAWEKKLYK EVKGEEKLRS IYEEKCKSLK KMDTHGAEAT KIEATRAYIK KLLMKIDISI RSVDSISKRI HKLRDEELQP
601: QLTQLIHGLV RMWRAMLKCH QKQFQAIMES KVRSVKANTV SSSKAFLDLE MELRDWCISF NEWVNTQKKY VHFLNQWLSK CLHYEPEATE DGYAPFSPSQ
701: IGAPPIFSIC KDWQEAMKRV SGEKVSNAMQ SFASSLHELW EKQEEEEQRV RAAAEMEFRD HGEYDKRSVV SKGRSESGVS VLDDLKVDLD SMRKKLVEER
801: GKRKETTVKV ASSSSSTLKG GLAPIFDALR KFNVEVVKAH GIVRLQRPQT SS
001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9CAQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.