Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39136 | Canola | nucleus | 97.21 | 97.34 |
| CDY66508 | Canola | cytosol, nucleus | 49.87 | 88.89 |
| AT2G19090.1 | Thale cress | nucleus | 83.42 | 77.27 |
| CDY28162 | Canola | cytosol | 38.46 | 71.78 |
| CDY28161 | Canola | nucleus | 18.43 | 67.8 |
| CDX68628 | Canola | nucleus | 59.42 | 66.27 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 54.38 | 53.45 |
| PGSC0003DMT400015690 | Potato | nucleus | 52.12 | 51.44 |
| KRH19063 | Soybean | nucleus | 50.93 | 51.27 |
| Solyc07g047830.2.1 | Tomato | nucleus | 51.86 | 51.25 |
| KRH02818 | Soybean | nucleus | 50.53 | 51.14 |
| KRH37304 | Soybean | nucleus | 51.46 | 50.72 |
| KRH12287 | Soybean | nucleus | 51.86 | 50.58 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 40.19 | 48.48 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 36.47 | 44.21 |
| Zm00001d046842_P001 | Maize | nucleus | 23.61 | 43.84 |
| Zm00001d046839_P001 | Maize | nucleus | 23.61 | 43.84 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 33.82 | 43.0 |
| Zm00001d012496_P001 | Maize | nucleus | 20.95 | 42.13 |
| Zm00001d013369_P001 | Maize | nucleus | 30.24 | 37.56 |
| OQU80872 | Sorghum | nucleus | 38.46 | 36.43 |
| Zm00001d049762_P007 | Maize | nucleus | 38.33 | 36.26 |
| Zm00001d031530_P006 | Maize | nucleus | 37.8 | 36.17 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 20.29 | 34.62 |
| EES06355 | Sorghum | cytosol | 26.92 | 33.12 |
| Zm00001d053766_P001 | Maize | cytosol | 27.32 | 32.96 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 37.8 | 32.87 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 27.06 | 32.59 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 27.19 | 32.39 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 26.92 | 32.17 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 36.34 | 32.01 |
| Os02t0175301-00 | Rice | nucleus | 15.78 | 31.73 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 37.67 | 31.38 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 34.35 | 30.8 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 12.07 | 28.89 |
| CDX69386 | Canola | nucleus | 20.42 | 25.5 |
| CDY42005 | Canola | nucleus | 20.69 | 25.49 |
| CDX88008 | Canola | nucleus | 23.87 | 25.17 |
| CDX76322 | Canola | cytosol | 23.21 | 24.75 |
| CDY17530 | Canola | cytosol | 23.21 | 24.65 |
| CDY31475 | Canola | nucleus | 19.1 | 23.92 |
| CDY07877 | Canola | cytosol | 22.55 | 23.78 |
| CDX87081 | Canola | nucleus | 16.71 | 23.6 |
| CDY04477 | Canola | nucleus | 22.28 | 23.37 |
| CDX71474 | Canola | nucleus | 22.15 | 23.23 |
| CDX75484 | Canola | cytosol, plastid | 20.95 | 22.67 |
| CDX69122 | Canola | nucleus | 22.41 | 22.5 |
| CDX77992 | Canola | nucleus | 18.17 | 21.78 |
| CDX73734 | Canola | nucleus | 18.17 | 21.41 |
| CDY04672 | Canola | nucleus | 24.01 | 20.76 |
| CDX88372 | Canola | nucleus | 22.68 | 20.7 |
| CDY08177 | Canola | nucleus | 24.01 | 20.31 |
| CDY41788 | Canola | nucleus | 22.81 | 20.19 |
| CDY18335 | Canola | cytosol | 18.57 | 19.8 |
| CDY42454 | Canola | cytosol | 18.3 | 19.69 |
| CDX88193 | Canola | nucleus | 18.97 | 19.4 |
| CDX84637 | Canola | cytosol | 17.24 | 19.37 |
| CDX80528 | Canola | nucleus | 18.7 | 19.24 |
| CDX83412 | Canola | nucleus | 16.84 | 18.87 |
| CDX79570 | Canola | cytosol | 16.84 | 18.43 |
| CDY42691 | Canola | nucleus | 17.64 | 18.4 |
| CDY41178 | Canola | nucleus | 17.37 | 18.17 |
| CDX71821 | Canola | nucleus | 17.11 | 18.17 |
| CDY56992 | Canola | nucleus | 17.37 | 18.02 |
| CDX95620 | Canola | nucleus | 16.58 | 17.99 |
| CDX87516 | Canola | nucleus | 10.61 | 17.78 |
| CDY61085 | Canola | nucleus | 16.58 | 16.76 |
| CDY52975 | Canola | nucleus | 16.31 | 16.47 |
| CDY29526 | Canola | peroxisome | 19.5 | 12.79 |
Protein Annotations
| EnsemblPlants:CDX82615 | EnsemblPlantsGene:GSBRNA2T00137817001 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDX82615 | ProteinID:CDX82615.1 | SEG:seg | UniParc:UPI0004EF2A10 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC07g02510D
Coordinates
chrLK031829:-:500168..502783
Molecular Weight (calculated)
85236.5 Da
IEP (calculated)
8.506
GRAVY (calculated)
-0.694
Length
754 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSHSKLDD EESVQICKDR KRFIKQAIEH RTKFASSHIA YIQSLRKVSD ALHDFIEGDN YKPPHDFLQD SFVTPVKRLP PSRSRRLSSS NRSGGGGGEF
101: ITISPSSMPQ KMIQDKPRTK VRASYLMANR TRPVRVEERS PETFRVESFS PPSQQYGEAD GFFGMNMNMN MNTSAASSSS FWNPLSSPEQ QRLSTHNIPP
201: PSPQNSQWDF FWNPFSSLEY YGYNNSYDRG SVDNNRSGTK DDEVRGLRRV REEEGIPDLE EDDEPQPPQP VRFHTPKVVV EESKSYEKCV GKQEQRTVEV
301: PRVETTGSVA VEEVKNVVNV AKRETPGFTV YVNRRPTSMA EVIKDLEDQF TTICDAAKEV SGLLEASRAQ YAPSSSSDHS AMKKLNPVAL FRSGSSRSSS
401: SRFLLTSSSG GSKESGSESR SDGSDESCMV SGSHQTTLDK LFAWEKKLYD EVKSGERVRR AYEKKCMQLR NQDVKGDDPF AVDKTRATIR DLDTQIKVSI
501: HSIESISKRI ETLRDQELLP QLLELVQGLT RMWQVMAESH QIQKRTLDEA KMLLAGTPVS KRHKKRQQQQ PSIMPETINS QRLAQSALNL EAQLRNWRSC
601: FEFWITSQRS YMTALSGWLL RCLRCDPDPE KVRLSSCPHP IYRVCIQWSR LLNSLNEKPV LDKLEFFASG MGSVYARQVR EDPNWSGGGS RRYSGSESLD
701: LVLADRVGEE DVVMTAEKLA EVAVKVLCHG MSVAVSSLAD LLTNQRKLLT PSRM
101: ITISPSSMPQ KMIQDKPRTK VRASYLMANR TRPVRVEERS PETFRVESFS PPSQQYGEAD GFFGMNMNMN MNTSAASSSS FWNPLSSPEQ QRLSTHNIPP
201: PSPQNSQWDF FWNPFSSLEY YGYNNSYDRG SVDNNRSGTK DDEVRGLRRV REEEGIPDLE EDDEPQPPQP VRFHTPKVVV EESKSYEKCV GKQEQRTVEV
301: PRVETTGSVA VEEVKNVVNV AKRETPGFTV YVNRRPTSMA EVIKDLEDQF TTICDAAKEV SGLLEASRAQ YAPSSSSDHS AMKKLNPVAL FRSGSSRSSS
401: SRFLLTSSSG GSKESGSESR SDGSDESCMV SGSHQTTLDK LFAWEKKLYD EVKSGERVRR AYEKKCMQLR NQDVKGDDPF AVDKTRATIR DLDTQIKVSI
501: HSIESISKRI ETLRDQELLP QLLELVQGLT RMWQVMAESH QIQKRTLDEA KMLLAGTPVS KRHKKRQQQQ PSIMPETINS QRLAQSALNL EAQLRNWRSC
601: FEFWITSQRS YMTALSGWLL RCLRCDPDPE KVRLSSCPHP IYRVCIQWSR LLNSLNEKPV LDKLEFFASG MGSVYARQVR EDPNWSGGGS RRYSGSESLD
701: LVLADRVGEE DVVMTAEKLA EVAVKVLCHG MSVAVSSLAD LLTNQRKLLT PSRM
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.