CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69386	Canola	nucleus	94.44	95.7
Bra011832.1-P	Field mustard	nucleus	97.22	86.61
AT4G39790.1	Thale cress	plastid	82.03	76.41
VIT_00s1403g00010.t01	Wine grape	nucleus	58.5	48.51
KRG97595	Soybean	cytosol	52.12	48.26
PGSC0003DMT400053154	Potato	nucleus	56.21	47.91
Solyc04g054880.2.1	Tomato	nucleus	55.88	47.7
GSMUA_Achr2P22150_001	Banana	cytosol	45.42	47.12
KRH59380	Soybean	nucleus	56.21	46.8
KRH43215	Soybean	nucleus	56.54	46.69
GSMUA_Achr11P...	Banana	cytosol	42.97	39.49
Os05t0172300-01	Rice	nucleus	45.91	38.92
EES08807	Sorghum	nucleus	45.42	38.66
Os05t0255800-01	Rice	nucleus	29.25	37.92
HORVU7Hr1G018230.3	Barley	nucleus	45.1	37.4
TraesCS4A01G376900.1	Wheat	nucleus	44.93	37.36
Zm00001d048891_P002	Maize	nucleus	45.42	37.27
TraesCS7D01G074000.2	Wheat	nucleus	44.61	37.14
Os09t0368900-00	Rice	nucleus	36.6	32.65
TraesCS5A01G189900.1	Wheat	cytosol	37.58	32.35
HORVU5Hr1G058240.4	Barley	nucleus	37.25	32.16
TraesCS5D01G201000.1	Wheat	nucleus	37.25	32.07
TraesCS5B01G193300.1	Wheat	cytosol	37.09	31.48
CDY04477	Canola	nucleus	36.6	31.15
CDX71474	Canola	nucleus	36.44	31.02
CDY28162	Canola	cytosol	19.44	29.46
CDY66508	Canola	cytosol, nucleus	19.12	27.66
CDX68628	Canola	nucleus	25.49	23.08
CDX87081	Canola	nucleus	20.1	23.03
CDX77992	Canola	nucleus	22.06	21.46
CDX76322	Canola	cytosol	24.67	21.36
CDY17530	Canola	cytosol	24.51	21.13
CDX73734	Canola	nucleus	22.06	21.09
CDX82615	Canola	nucleus	25.49	20.69
CDX69122	Canola	nucleus	25.33	20.64
CDY39136	Canola	nucleus	25.33	20.58
CDY28161	Canola	nucleus	6.86	20.49
CDX88008	Canola	nucleus	23.69	20.28
CDY31475	Canola	nucleus	19.93	20.27
CDY07877	Canola	cytosol	23.37	20.0
CDX75484	Canola	cytosol, plastid	21.9	19.23
CDX80528	Canola	nucleus	22.71	18.96
CDX83412	Canola	nucleus	20.59	18.72
CDX88193	Canola	nucleus	22.39	18.59
CDX84637	Canola	cytosol	20.1	18.33
CDY04672	Canola	nucleus	25.82	18.12
CDY08177	Canola	nucleus	26.31	18.07
CDX88372	Canola	nucleus	24.18	17.92
CDX79570	Canola	cytosol	20.1	17.85
CDY41788	Canola	nucleus	24.84	17.84
CDX95620	Canola	nucleus	20.1	17.7
CDY41178	Canola	nucleus	20.75	17.61
CDX71821	Canola	nucleus	20.26	17.46
CDY56992	Canola	nucleus	20.42	17.19
CDY42691	Canola	nucleus	20.1	17.01
CDY52975	Canola	nucleus	20.1	16.47
CDY61085	Canola	nucleus	19.93	16.35
CDY42454	Canola	cytosol	17.48	15.26
CDY18335	Canola	cytosol	17.48	15.13
CDX87516	Canola	nucleus	8.82	12.0
CDY29526	Canola	peroxisome	19.93	10.62

Protein Annotations

EnsemblPlants:CDY42005	EnsemblPlantsGene:GSBRNA2T00074014001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF4	PFAM:PF04782	PFAM:PF04783	ProteinID:CDY42005	ProteinID:CDY42005.1	SEG:seg
UniParc:UPI0004EEA8AB	UniProt:A0A078HTZ9	MapMan:35.1	:	:	:

Description

BnaA01g05770DBnaA01g05770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTZ9]

Coordinates

chrLK032511:-:282300..285236

Molecular Weight (calculated)

69789.2 Da

IEP (calculated)

7.362

GRAVY (calculated)

-0.738

Length

612 amino acids

Sequence
(BLAST)

001: MSPSILEKMG CSNSKEASTK KKKKNEPLLL CKERKRFVKQ AIDSRCALAA AHVSYVRSLR NIGARLRQYA EAETVAAVAS SPSHNSSSYP DDDDDGDSVD
101: SPLMTYTMNP LDMPELSPPP PPPPPRPRRP ETSSWDYFDT CDEFDSFRLT DNASVIGLEK QSKQSNAEDF KTEQRKQSSE DEGEREDPSE FITHRAKDFV
201: SSIKDIEHKF FRASESGKEV SRMLEANKIR VGFDDTTTGK GNSVAFLSAL KRACCRGRKS HSPVFKEPLH QQVTKVIVWK RTSSSRSSTS RNPLIEEDHD
301: DDESGSDFTQ EFCMISGSHS SSLDRLYAWE RKLYDEVKAS EMIRKEYDKK CEQLRNQFTK DHSAKAMDKT RAAAKDLHSR IRVAIQSVDS ISKRIERIRD
401: EELQPQLLEF LQGLIRMWKA MLECHHSQYI TISLAYHCRN TSKTGPENAL KRRIWSELLE ETEYFGLSFA DLVNSMTSYV EAVNGWLHNC VLLPQERSTR
501: NRRPWSPRRV LAPPIFVLCR DWSAGMKSLP SDELSRSIKE FSTDMEMLGE EKNDSVLVSE DLSSVHSSLA KLLERLKKFS EASLKMYEDV KVRSEEAVVA
601: YTNHSNCGRP LL

Best Arabidopsis Sequence Match ( AT4G39790.1 )
(BLAST)

001: MGHSILEKMG CSNSKASMNK KNEPLHLCKE RKRFVKQAMD SRCALAAAHV SYIRSLRNIG ACLRQYAEAE TAHESSPSLT ATEPEKSPSH NSSYPDDSVD
101: SPLSHNSNPN PNPKPLFNLS YMKTETASST VTFTINPLSD GDDDLEVTMP AFSPPPPPRP RRPETSSWDY FDTCDDFDSF RFVGLSEQTE IDSECDAAVI
201: GLEKITSQGN VAKSGSETLQ DSSFKTKQRK QSCEDNDERE DPSEFITHRA KDFVSSMKDI EHKFFRASES GREVSRMLEV NKIRVGFADM TGKGNSIAFL
301: AALKRACCRG KSYSPVSQEP LSHQVTKVIV WKRTSSSRSS TSRNPLIQTS KEDHDDESGS DFIEEFCMIS GSHSSSLDRL YAWERKLYDE VKASEMIRKE
401: YDRKCEQLRN QFAKDHSAKS MDKTRAAAKD LHSRIRVAIQ SVESISKRIE RIRDDELHPQ LLEFLQGLIR MWKAMLECHH TQYITISLAY HCRHSSKTAH
501: ESVLKRRILA ELLEETECFG LSFVDLVHSM ASYVEALNGW LHNCVLLPQE RSTRNRRPWS PRRVLAPPIF VLCRDWSAGI KTLPSDELSG SIKGFSLDME
601: MLGEEKGGSL LVSDLSSVHS SLAKLLERLK KFSEASLKMY EDVKVKSEAA RVAYTNK

Arabidopsis Description

BZIP transcription factor, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q5XV54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.