Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009665.1-P | Field mustard | cytosol | 96.64 | 97.74 |
| CDY07877 | Canola | cytosol | 90.63 | 90.63 |
| AT2G17110.1 | Thale cress | nucleus | 72.73 | 70.94 |
| CDX76322 | Canola | cytosol | 63.5 | 64.22 |
| CDY17530 | Canola | cytosol | 63.22 | 63.66 |
| CDX75484 | Canola | cytosol, plastid | 60.28 | 61.84 |
| CDX69122 | Canola | nucleus | 63.08 | 60.05 |
| KRH14028 | Soybean | cytosol | 52.87 | 51.57 |
| KRH74089 | Soybean | cytosol | 55.38 | 50.57 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 52.03 | 46.1 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 52.17 | 45.94 |
| Solyc10g074470.1.1 | Tomato | cytosol | 51.47 | 45.83 |
| Solyc01g112050.2.1 | Tomato | nucleus | 53.15 | 42.7 |
| Os02t0669900-01 | Rice | cytosol | 25.31 | 42.39 |
| PGSC0003DMT400048013 | Potato | nucleus | 53.43 | 41.84 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 20.14 | 38.5 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.94 | 38.24 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 37.2 | 37.78 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 35.24 | 37.06 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 28.11 | 36.68 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 35.66 | 36.43 |
| OQU85656 | Sorghum | cytosol | 38.88 | 36.29 |
| Zm00001d017553_P001 | Maize | cytosol | 37.9 | 35.99 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 31.75 | 34.45 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 36.08 | 33.86 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 36.08 | 33.81 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 35.94 | 33.68 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 35.66 | 33.55 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 28.25 | 33.01 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 35.1 | 32.98 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 34.97 | 32.94 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 35.1 | 32.77 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 29.93 | 32.67 |
| KXG26898 | Sorghum | cytosol | 36.08 | 32.53 |
| Os08t0551200-00 | Rice | cytosol | 36.64 | 32.35 |
| Zm00001d002669_P002 | Maize | cytosol | 35.66 | 32.32 |
| Zm00001d026130_P001 | Maize | nucleus | 35.38 | 32.07 |
| Os09t0547300-01 | Rice | nucleus | 40.7 | 31.66 |
| EER97130 | Sorghum | nucleus | 40.28 | 31.54 |
| Zm00001d006286_P001 | Maize | nucleus | 39.58 | 30.96 |
| CDY31475 | Canola | nucleus | 26.01 | 30.9 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 34.97 | 30.86 |
| Zm00001d021452_P001 | Maize | nucleus | 40.28 | 30.61 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 40.84 | 30.42 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 40.98 | 30.27 |
| CDY28161 | Canola | nucleus | 8.67 | 30.24 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 40.7 | 30.19 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 40.28 | 30.03 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 33.43 | 29.95 |
| CDX88372 | Canola | nucleus | 34.55 | 29.9 |
| CDY41788 | Canola | nucleus | 34.83 | 29.23 |
| CDY04672 | Canola | nucleus | 35.1 | 28.78 |
| CDY08177 | Canola | nucleus | 35.24 | 28.28 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 34.55 | 26.33 |
| CDY28162 | Canola | cytosol | 14.83 | 26.24 |
| CDX68628 | Canola | nucleus | 23.36 | 24.7 |
| CDY66508 | Canola | cytosol, nucleus | 14.55 | 24.59 |
| CDX69386 | Canola | nucleus | 20.42 | 24.17 |
| CDX82615 | Canola | nucleus | 25.17 | 23.87 |
| CDX87516 | Canola | nucleus | 14.96 | 23.78 |
| CDY39136 | Canola | nucleus | 25.04 | 23.77 |
| CDY42005 | Canola | nucleus | 20.28 | 23.69 |
| CDY42454 | Canola | cytosol | 23.22 | 23.68 |
| CDY18335 | Canola | cytosol | 22.94 | 23.2 |
| CDX77992 | Canola | nucleus | 18.32 | 20.83 |
| CDX73734 | Canola | nucleus | 18.46 | 20.62 |
| CDX87081 | Canola | nucleus | 15.1 | 20.22 |
| CDY04477 | Canola | nucleus | 20.14 | 20.03 |
| CDX71474 | Canola | nucleus | 19.58 | 19.47 |
| CDX83412 | Canola | nucleus | 17.9 | 19.02 |
| CDX84637 | Canola | cytosol | 16.78 | 17.88 |
| CDY42691 | Canola | nucleus | 17.9 | 17.7 |
| CDY56992 | Canola | nucleus | 17.9 | 17.61 |
| CDX95620 | Canola | nucleus | 17.06 | 17.55 |
| CDX71821 | Canola | nucleus | 17.34 | 17.46 |
| CDX80528 | Canola | nucleus | 17.9 | 17.46 |
| CDX88193 | Canola | nucleus | 17.9 | 17.37 |
| CDY41178 | Canola | nucleus | 17.2 | 17.06 |
| CDX79570 | Canola | cytosol | 16.22 | 16.84 |
| CDY52975 | Canola | nucleus | 17.48 | 16.73 |
| CDY61085 | Canola | nucleus | 17.34 | 16.62 |
| CDY29526 | Canola | peroxisome | 26.43 | 16.45 |
Protein Annotations
| EnsemblPlants:CDX88008 | EnsemblPlantsGene:GSBRNA2T00147411001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDX88008 | ProteinID:CDX88008.1 | SEG:seg |
| UniParc:UPI0004EE8780 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g25990D
Coordinates
chrLK031854:+:94300..97065
Molecular Weight (calculated)
80245.4 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.663
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTTSKLDD LPAVALCLDR CGFLQTAIQQ RYALADSHLA YTQSLQVVAQ SLHTFIDHHH RFAAEDSHHP PEEDDSPKRA DSGSGHIEFD SDSDEIDSLH
101: HSSPLHEDPS FTRYSNPDPP TSSYLHMNYM KNSSMPPSVV YEQRPSSPQR VYLGESSASN YDNPYPSYGP SKPPPPPPPR TEGWDFLNLF DYAPYTLTQD
201: DSREVREEEG IPDLEDDFHR EVVKEVHGKQ KLVAGKAPVP AVDDKEEPPG GGGGQASRFQ TRPSLAYEVH VVEKKVVESG VEEVRRSNPA PRGGGVRRGV
301: PEVAKEIEAQ FFRAAESASE IAVLLEVGKQ HPNARKHGGA ASSKMIQEVT PSPSVVSSSQ PSTSKKAKAS SSAAAAAPTY ADIEAELALR SRNLSSTLHK
401: LHLWEKKLYE EVKAEEKLRL LHERKLRKLK RMDERGTDAP KVDSTRRFVR SLSTKIRIAI QVVDKISVTI NKIRDEELWL QLNQLIQGLS RMWKSMLDCH
501: RSQCKAIKEA RGLGSIRASK KLPDDHLEAT RVLGHDLINW ILRFSGWVSV QKGFVRGLNS WLMKCLIYEP EETPDGIVPF SPGRLGAPMI FVICNQWEQA
601: LDRISEKEVV EAMRRFTASV LHLWEQDRLE TMERMIGHGG EEQRIQKEIQ EMESKMVLVG SGGDRSDTSN ESLQGSLRRI FEAMERFSAE SVRAYDDLLE
701: RAAEKENSSQ ESEED
101: HSSPLHEDPS FTRYSNPDPP TSSYLHMNYM KNSSMPPSVV YEQRPSSPQR VYLGESSASN YDNPYPSYGP SKPPPPPPPR TEGWDFLNLF DYAPYTLTQD
201: DSREVREEEG IPDLEDDFHR EVVKEVHGKQ KLVAGKAPVP AVDDKEEPPG GGGGQASRFQ TRPSLAYEVH VVEKKVVESG VEEVRRSNPA PRGGGVRRGV
301: PEVAKEIEAQ FFRAAESASE IAVLLEVGKQ HPNARKHGGA ASSKMIQEVT PSPSVVSSSQ PSTSKKAKAS SSAAAAAPTY ADIEAELALR SRNLSSTLHK
401: LHLWEKKLYE EVKAEEKLRL LHERKLRKLK RMDERGTDAP KVDSTRRFVR SLSTKIRIAI QVVDKISVTI NKIRDEELWL QLNQLIQGLS RMWKSMLDCH
501: RSQCKAIKEA RGLGSIRASK KLPDDHLEAT RVLGHDLINW ILRFSGWVSV QKGFVRGLNS WLMKCLIYEP EETPDGIVPF SPGRLGAPMI FVICNQWEQA
601: LDRISEKEVV EAMRRFTASV LHLWEQDRLE TMERMIGHGG EEQRIQKEIQ EMESKMVLVG SGGDRSDTSN ESLQGSLRRI FEAMERFSAE SVRAYDDLLE
701: RAAEKENSSQ ESEED
001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.