Factsheet for GSMUA_Achr1P18120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P14690_001	Banana	nucleus	72.5	70.03
GSMUA_Achr7P04020_001	Banana	cytosol	63.24	61.43
GSMUA_Achr11P...	Banana	mitochondrion	43.38	43.9
EER97130	Sorghum	nucleus	55.59	41.4
Os09t0547300-01	Rice	nucleus	55.88	41.35
Zm00001d006286_P001	Maize	nucleus	53.97	40.15
Os08t0551200-00	Rice	cytosol	46.91	39.38
Zm00001d021452_P001	Maize	nucleus	54.41	39.32
KRH14028	Soybean	cytosol	41.91	38.88
TraesCS7D01G273600.1	Wheat	cytosol	45.59	38.27
TraesCS5B01G348100.1	Wheat	nucleus	53.68	38.02
HORVU7Hr1G057760.4	Barley	cytosol	36.62	38.02
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	36.76	37.94
TraesCS5D01G353500.1	Wheat	nucleus	53.68	37.86
TraesCS5A01G347200.1	Wheat	nucleus	53.38	37.85
KRH74089	Soybean	cytosol	43.53	37.8
HORVU5Hr1G086500.2	Barley	nucleus	53.68	37.71
Solyc10g074470.1.1	Tomato	cytosol	44.26	37.48
VIT_03s0038g03260.t01	Wine grape	cytosol	44.71	37.44
PGSC0003DMT400043330	Potato	mitochondrion	44.12	37.17
CDY17530	Canola	cytosol	38.38	36.76
CDX76322	Canola	cytosol	38.09	36.63
TraesCS7B01G171500.1	Wheat	cytosol	42.94	36.59
Bra020807.1-P	Field mustard	nucleus	40.29	35.91
CDX88008	Canola	nucleus	37.06	35.24
Bra009665.1-P	Field mustard	cytosol	36.62	35.22
CDX69122	Canola	nucleus	38.82	35.15
AT2G17110.1	Thale cress	nucleus	37.79	35.06
Solyc01g112050.2.1	Tomato	nucleus	45.29	34.61
PGSC0003DMT400048013	Potato	nucleus	45.88	34.17
AT4G35240.1	Thale cress	nucleus	43.09	33.87
CDY07877	Canola	cytosol	35.44	33.71
CDX75484	Canola	cytosol, plastid	34.41	33.57
Bra011597.1-P	Field mustard	nucleus	41.18	33.49
KRH60958	Soybean	cytosol	32.35	33.23
VIT_18s0001g00170.t01	Wine grape	cytosol	35.44	32.48
TraesCS7A01G273600.1	Wheat	cytosol, mitochondrion, nucleus	44.71	32.41
KRH51633	Soybean	cytosol	31.32	32.08
GSMUA_Achr3P22040_001	Banana	cytosol	31.91	31.63
AT1G20530.1	Thale cress	cytosol	25.88	28.66
CDY31475	Canola	nucleus	25.0	28.24
GSMUA_Achr9P08510_001	Banana	nucleus	31.76	27.62
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	21.18	26.28
GSMUA_Achr3P19020_001	Banana	cytosol	31.62	26.06
GSMUA_Achr7P04930_001	Banana	nucleus	22.06	25.3
GSMUA_Achr3P00490_001	Banana	nucleus	22.79	24.92
GSMUA_Achr1P26500_001	Banana	cytosol	19.12	24.67
GSMUA_Achr8P34030_001	Banana	cytosol	21.47	24.5
GSMUA_Achr7P16020_001	Banana	nucleus	21.76	23.68
GSMUA_Achr2P22150_001	Banana	cytosol	19.56	22.54
GSMUA_Achr6P32100_001	Banana	cytosol	19.71	22.26
GSMUA_Achr3P00690_001	Banana	nucleus	15.88	21.3
GSMUA_Achr9P05210_001	Banana	nucleus	19.56	20.59
GSMUA_Achr11P...	Banana	cytosol	20.0	20.42
GSMUA_Achr3P24800_001	Banana	nucleus	18.09	20.4
GSMUA_Achr11P...	Banana	cytosol	19.41	20.0
GSMUA_Achr9P30410_001	Banana	cytosol	17.65	19.51
GSMUA_Achr11P...	Banana	nucleus	20.74	19.5
GSMUA_Achr4P21640_001	Banana	nucleus	19.85	19.29
GSMUA_Achr8P10940_001	Banana	nucleus	20.29	18.75
GSMUA_Achr1P17130_001	Banana	nucleus	16.62	18.62
GSMUA_Achr5P00570_001	Banana	cytosol	17.94	18.26
Bra025823.1-P	Field mustard	peroxisome	26.03	15.42
CDY29526	Canola	peroxisome	25.88	15.32

Protein Annotations

EnsemblPlants:GSMUA_Achr1P18120_001	EnsemblPlants:GSMUA_Achr1T18120_001	EnsemblPlantsGene:GSMUA_Achr1G18120_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF2	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002949B43
UniProt:M0S0X0	MapMan:35.1	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G18120_001]

Coordinates

chr1:-:13557111..13562228

Molecular Weight (calculated)

76391.0 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.545

Length

680 amino acids

Sequence
(BLAST)

001: MGCGGSKLEE AAAVAHCRER SQLLADAIHY RYALADAHAA YARSLRSVGD AIQGFIYPGL PLASPVLPLP AQRKGDPLPP PAAAASVPSA AVRGHSRSDS
101: GSHIQFHPTD SDDDSLLHSD GASEPIRLGS VDEQPHVAYP YYGYPYPPQN SNLDPYPSYP YMGYGDGMQR GFLGSSSRPP NIRPPAVADG ASSTSREPPP
201: PPAPQASTWD FLNPFDSWDN YYPPYTPSRS SRELREEEGI PDLEDEDHEV ALNGSKEGVV GMSRSYQDVF EVVQEIKTQF DRASESANQV SKMLEVGKVL
301: YHQKNSPYKV SARMICGLPL LATYDNEDLL VFEEDKAMGC GNLSSTLQKL YNWERKLLEE VMAEEKMRTL YEQNRERLRH LSERGAEAEK VEAVETSNMK
401: LSTKIRIAIQ VVGTISSKIS QLRDEELWPQ VRELIDGFMG MWKVMWECHR IQCQAISEAK DLDSIVSGVK HGDPRMDAVK QLEFKMVDWI TNFSVWVTVQ
501: RSYVKSLNGW LVKGMHYVPE VTDDGVVPFS PGRLGAPPVF VICNYWSQSV DRISKRDVVD AVHAFADNVF NIWQQQKVEQ QQTLSANRDM DSKLRSMEKE
601: EQQMLKQKRK LLLISSENGV SISEHVVQQG STVNSLQLSL KQVFEAMENF TADSMKTYEV LHKRSEEEKQ RCTRENEIVS

Best Arabidopsis Sequence Match ( AT4G35240.3 )
(BLAST)

001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.