Factsheet for GSMUA_Achr1P07380_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P34030_001	Banana	cytosol	64.42	59.23
VIT_03s0038g02660.t01	Wine grape	nucleus	53.28	44.85
Os09t0542500-00	Rice	cytosol	43.25	43.25
EER97113	Sorghum	cytosol	55.66	42.13
TraesCS5D01G340500.1	Wheat	plastid	56.75	42.08
TraesCS5B01G335000.1	Wheat	cytosol	56.39	41.81
TraesCS5A01G335700.1	Wheat	cytosol	56.57	41.5
Zm00001d022598_P001	Maize	cytosol	54.56	41.36
HORVU5Hr1G084580.2	Barley	cytosol	54.74	41.15
VIT_00s0434g00010.t01	Wine grape	nucleus	51.64	39.75
VIT_00s0264g00010.t01	Wine grape	nucleus	51.64	39.03
Solyc01g111740.2.1	Tomato	cytosol	49.82	37.45
PGSC0003DMT400046483	Potato	cytosol	50.18	37.36
KRG90664	Soybean	cytosol	52.19	37.09
KRH36090	Soybean	nucleus	50.91	36.38
GSMUA_Achr7P16020_001	Banana	nucleus	29.74	26.08
GSMUA_Achr2P22150_001	Banana	cytosol	27.74	25.76
GSMUA_Achr6P32100_001	Banana	cytosol	26.82	24.42
GSMUA_Achr1P26500_001	Banana	cytosol	22.99	23.91
GSMUA_Achr9P05210_001	Banana	nucleus	27.37	23.22
GSMUA_Achr3P00490_001	Banana	nucleus	25.73	22.67
GSMUA_Achr3P22040_001	Banana	cytosol	27.74	22.16
GSMUA_Achr11P...	Banana	cytosol	26.82	22.07
GSMUA_Achr7P04930_001	Banana	nucleus	23.72	21.92
GSMUA_Achr1P18120_001	Banana	cytosol	26.28	21.18
GSMUA_Achr11P...	Banana	mitochondrion	25.55	20.83
GSMUA_Achr3P24800_001	Banana	nucleus	22.81	20.73
GSMUA_Achr7P04020_001	Banana	cytosol	25.55	20.0
GSMUA_Achr3P00690_001	Banana	nucleus	18.43	19.92
GSMUA_Achr3P14690_001	Banana	nucleus	25.55	19.89
GSMUA_Achr11P...	Banana	cytosol	23.72	19.7
GSMUA_Achr9P30410_001	Banana	cytosol	21.9	19.51
GSMUA_Achr11P...	Banana	nucleus	25.0	18.95
GSMUA_Achr9P08510_001	Banana	nucleus	26.82	18.8
GSMUA_Achr4P21640_001	Banana	nucleus	23.91	18.71
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	22.08	18.36
GSMUA_Achr5P00570_001	Banana	cytosol	22.26	18.26
GSMUA_Achr1P17130_001	Banana	nucleus	20.07	18.12
GSMUA_Achr8P10940_001	Banana	nucleus	23.91	17.8
GSMUA_Achr3P19020_001	Banana	cytosol	25.73	17.09

Protein Annotations

EnsemblPlants:GSMUA_Achr1P07380_001	EnsemblPlants:GSMUA_Achr1T07380_001	EnsemblPlantsGene:GSMUA_Achr1G07380_001	InterPro:DUF630	InterPro:DUF632	PANTHER:PTHR21450
PANTHER:PTHR21450:SF17	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI00029649B8	UniProt:M0RXU6
MapMan:35.1	:	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G07380_001]

Coordinates

chr1:-:5773746..5778565

Molecular Weight (calculated)

61334.6 Da

IEP (calculated)

6.835

GRAVY (calculated)

-0.410

Length

548 amino acids

Sequence
(BLAST)

001: MGGCATSRLG GSGEEDDPVA LCRERKRLLK AAVERRYALA AAHAAYVRSL NAVASAIDLF VVRHSAPTAI LVTLPDADVD PSPPSSSSAF LPHTPREANA
101: ESLECPGSLP LSPSSDSSSD DDVEGVFGWD FFNPFDGMQT TVEAVAMVGS LDRSSDEDLR LMQGSGRELL QALRDVEDHF IRAHDSGKEV SRMLEANMVL
201: LQSGLEEIKG DSFLSSSTSE MLMPKKNSSK MIQAITWHRS PSSLSSSYWS HLASSSSSTT WSESKSDLFD DYGGMESGSH SQTLGRLYAW EKKLYEEVKA
301: GDQIRQAYEK KCLQLRNQNA KGVESRSVDK TRAAVRDLYS RIWVALRAVE SIAERIQKLR DEELQPQIIE LLQGLMGSWK VMLESHEAQK QIMFEVNLFT
401: CPSYGKYSND SQRLATLTLV AELHHWRRYF RGYVSAQKAY VEALDGWLSK FILPDMEFYS RTRSSLSHMA SGPPLVVICH QWSTSLGKLR DSAVTYSMRS
501: FARTVRFLSV KQVEEQQQKK KVDALTKELE RRCTSNLFQP QKLCECKI

Best Arabidopsis Sequence Match ( AT1G77500.1 )
(BLAST)

001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS

Arabidopsis Description

DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9CAQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.