Factsheet for GSMUA_Achr9P30410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P00570_001	Banana	cytosol	75.12	69.16
Os01t0585600-01	Rice	nucleus	52.36	47.01
VIT_10s0003g04480.t01	Wine grape	nucleus	47.97	45.25
Zm00001d011231_P001	Maize	nucleus	49.59	44.92
EES00973	Sorghum	nucleus	51.22	44.87
TraesCS3B01G240800.1	Wheat	nucleus	50.57	44.49
HORVU3Hr1G050880.1	Barley	nucleus	49.92	44.11
Zm00001d044312_P001	Maize	nucleus	50.08	43.94
TraesCS3A01G210200.1	Wheat	nucleus	49.59	43.76
TraesCS3D01G213000.1	Wheat	nucleus	49.59	43.63
GSMUA_Achr1P26500_001	Banana	cytosol	35.12	40.99
CDX84637	Canola	cytosol	40.33	36.96
CDX79570	Canola	cytosol	41.3	36.87
AT2G34670.2	Thale cress	nucleus	41.46	36.74
Bra022983.1-P	Field mustard	cytosol	40.98	36.57
GSMUA_Achr3P00690_001	Banana	nucleus	29.27	35.5
KRH12768	Soybean	cytosol	33.82	33.12
KRH37731	Soybean	nucleus	33.5	31.99
GSMUA_Achr4P21640_001	Banana	nucleus	30.41	26.71
GSMUA_Achr11P...	Banana	nucleus	31.22	26.56
GSMUA_Achr8P10940_001	Banana	nucleus	31.54	26.36
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	19.51	21.9
GSMUA_Achr8P34030_001	Banana	cytosol	21.14	21.81
GSMUA_Achr1P17130_001	Banana	nucleus	21.3	21.58
GSMUA_Achr2P22150_001	Banana	cytosol	20.49	21.36
GSMUA_Achr11P...	Banana	cytosol	22.76	21.21
GSMUA_Achr3P24800_001	Banana	nucleus	20.16	20.56
GSMUA_Achr3P22040_001	Banana	cytosol	22.11	19.83
GSMUA_Achr7P16020_001	Banana	nucleus	19.02	18.72
GSMUA_Achr11P...	Banana	cytosol	19.67	18.17
GSMUA_Achr6P32100_001	Banana	cytosol	17.56	17.94
GSMUA_Achr7P04020_001	Banana	cytosol	20.16	17.71
GSMUA_Achr3P00490_001	Banana	nucleus	17.89	17.68
GSMUA_Achr1P18120_001	Banana	cytosol	19.51	17.65
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	18.54	17.3
GSMUA_Achr11P...	Banana	mitochondrion	18.86	17.26
GSMUA_Achr3P14690_001	Banana	nucleus	19.67	17.19
GSMUA_Achr7P04930_001	Banana	nucleus	16.42	17.03
GSMUA_Achr9P05210_001	Banana	nucleus	17.07	16.25
GSMUA_Achr9P08510_001	Banana	nucleus	20.65	16.24
GSMUA_Achr3P19020_001	Banana	cytosol	19.19	14.3

Protein Annotations

EnsemblPlants:GSMUA_Achr9P30410_001	EnsemblPlants:GSMUA_Achr9T30410_001	EnsemblPlantsGene:GSMUA_Achr9G30410_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF21	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI000295251F
UniProt:M0U4U8	MapMan:35.1	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G30410_001]

Coordinates

chr9:-:33678413..33683316

Molecular Weight (calculated)

69461.4 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.480

Length

615 amino acids

Sequence
(BLAST)

001: MGCTYSRVEV DEVVWRCKER RRLMKQLLSC RAELAAAHMA YLKSLRNTGA TLLQFTEVET MILGDAPPLR LTPIATKEAM EKKVSVEDPN DVDDNGSCGT
101: PRPPVPGSVW DFWDPFVPPA SSSSSSPVPQ REQGAVSQED FAVTVDRARE KCPLKELADD NSSVVSWLTK DTDMGMVVWR SKKTLAGIIR EVDDYFLKAA
201: AGGKDVAVLL ESNRSYRYPW DPETRKGKSS KSAKVVNALT WSWSFRSSHS NKDAQDAINA SRHGNHCTTL EKLFAEEQRL YKQVKDQENA KSQHKKIILL
301: LHKLEAGDYD FTRTEKTRSD IEELQCQMIS LKESINGTCL SISKLRDEEL LPQLIEFSVG LLKMWQTMYE CHQVQNHVSQ QANLLDNHLG TDPTTDSHQH
401: AISQLETEVA FWYNSFCNLF CCQREYAHIL NQWVQLTDCL PENDTLMGST SSIRGFCEEL QRVLDRLPDK VAAEAIKSFL LVIRSIILQH NKEHSLKKIS
501: DRLQSRLEKE LISLRTLEKH DEHALQDPQA NTLPSSTRHA KLEAFRKRVE EEKAKYLDSV RRSRAMTLNN LQTCLPNVFQ ALTGFSSVCA QALGGIVGST
601: EVAPSFSESV SPVHS

Best Arabidopsis Sequence Match ( AT2G34670.2 )
(BLAST)

001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.