Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G210200.1 | Wheat | nucleus | 93.68 | 93.54 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 93.82 | 93.42 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 93.39 | 92.99 |
| Os01t0585600-01 | Rice | nucleus | 77.01 | 78.25 |
| EES00973 | Sorghum | nucleus | 70.98 | 70.37 |
| Zm00001d044312_P001 | Maize | nucleus | 69.4 | 68.9 |
| Zm00001d011231_P001 | Maize | nucleus | 67.1 | 68.78 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 44.11 | 49.92 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 46.55 | 48.5 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 40.23 | 42.94 |
| CDX84637 | Canola | cytosol | 35.2 | 36.51 |
| Bra022983.1-P | Field mustard | cytosol | 35.49 | 35.85 |
| AT2G34670.2 | Thale cress | nucleus | 35.63 | 35.73 |
| CDX79570 | Canola | cytosol | 35.06 | 35.41 |
| HORVU5Hr1G084030.15 | Barley | nucleus | 33.05 | 33.92 |
| KRH12768 | Soybean | cytosol | 30.32 | 33.6 |
| KRH37731 | Soybean | nucleus | 30.75 | 33.23 |
| HORVU6Hr1G062350.2 | Barley | plastid | 19.83 | 24.17 |
| HORVU5Hr1G084580.2 | Barley | cytosol | 20.69 | 19.75 |
| HORVU5Hr1G058240.4 | Barley | nucleus | 19.4 | 19.04 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 10.2 | 18.98 |
| HORVU3Hr1G042920.6 | Barley | cytosol, nucleus | 23.56 | 18.68 |
| HORVU7Hr1G018230.3 | Barley | nucleus | 19.25 | 18.16 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 18.39 | 16.84 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 10.63 | 16.74 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 15.23 | 16.18 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 21.98 | 15.81 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 18.1 | 15.16 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 13.07 | 14.87 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 14.66 | 14.68 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 16.67 | 13.79 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G050880.1 | EnsemblPlantsGene:HORVU3Hr1G050880 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF21 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | SUPFAM:SSF101447 | UniParc:UPI0002954165 |
| UniProt:M0XK55 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:365777990..365782121
Molecular Weight (calculated)
77687.2 Da
IEP (calculated)
5.295
GRAVY (calculated)
-0.561
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCRHSKVED EEAVRRCRDR RKLMKQLVRR RVDLAAAHIT YLQALRNTGA TLRQFAEVET ASSHQSLPVA ASPPPPPPPP PPPPPPPPAY SVTSSMPPHS
101: VTSSMPPSPL PPPLIPFSPI RIRKREKRDG ELDGDDSTDE DDDTDSCSTP LPPPPPPGME WEYTDPITMR PLYFLPSSLA DQDDKEVASQ VSMDDDWVET
201: NIEFDEQDES VSRNADGVVR RMELHPAKSR VLGDENSSMV SSWVTKDSDS SVMAWANDKS LVEIAKEIDE YFLKAAASGT DVVILLDSAT GRLDPSEVQV
301: KKGKNSKSAK VFSTLSWSWS FKSVHANRES SSDACGYGYH GKTLDKLYDE EQKLYQLVKD EEFARLEYRK YSSLLQKLES GEHDRLQAEK VRDIIEELQT
401: RIMSLEEAVS LKCLTISKLR DEELYPQVIE LAAGLVHMWR NMYECHKVQN HIAQQASLLG NQPGSEPTTD SHYYATSQLE GEISAWQNSF CNLITLQREY
501: VTILNQWIGL TDCLPDNDGF MRSSSGIRSL CGELEHALEK LPDKVAAEAI KAFLSVIHSI VIQQAEERQL KKKSDSIESK FHAQLEKHSE NAMQSSGQVS
601: HARSYSVSKD DSKLDVFRKK VEEEKARYLN SLRTSRAMTL NHLQTSLPNV FHALTGFSGV CVQVFEGISR CSEAAAVASH SGVASPAVSS FDDHPL
101: VTSSMPPSPL PPPLIPFSPI RIRKREKRDG ELDGDDSTDE DDDTDSCSTP LPPPPPPGME WEYTDPITMR PLYFLPSSLA DQDDKEVASQ VSMDDDWVET
201: NIEFDEQDES VSRNADGVVR RMELHPAKSR VLGDENSSMV SSWVTKDSDS SVMAWANDKS LVEIAKEIDE YFLKAAASGT DVVILLDSAT GRLDPSEVQV
301: KKGKNSKSAK VFSTLSWSWS FKSVHANRES SSDACGYGYH GKTLDKLYDE EQKLYQLVKD EEFARLEYRK YSSLLQKLES GEHDRLQAEK VRDIIEELQT
401: RIMSLEEAVS LKCLTISKLR DEELYPQVIE LAAGLVHMWR NMYECHKVQN HIAQQASLLG NQPGSEPTTD SHYYATSQLE GEISAWQNSF CNLITLQREY
501: VTILNQWIGL TDCLPDNDGF MRSSSGIRSL CGELEHALEK LPDKVAAEAI KAFLSVIHSI VIQQAEERQL KKKSDSIESK FHAQLEKHSE NAMQSSGQVS
601: HARSYSVSKD DSKLDVFRKK VEEEKARYLN SLRTSRAMTL NHLQTSLPNV FHALTGFSGV CVQVFEGISR CSEAAAVASH SGVASPAVSS FDDHPL
001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.