Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G213000.1 | Wheat | nucleus | 96.85 | 96.85 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 95.85 | 96.13 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 92.99 | 93.39 |
| Os01t0585600-01 | Rice | nucleus | 76.97 | 78.54 |
| EES00973 | Sorghum | nucleus | 71.67 | 71.37 |
| Zm00001d044312_P001 | Maize | nucleus | 69.81 | 69.61 |
| Zm00001d011231_P001 | Maize | nucleus | 66.81 | 68.78 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 44.49 | 50.57 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 46.21 | 48.35 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 40.2 | 43.1 |
| CDX84637 | Canola | cytosol | 35.19 | 36.66 |
| Bra022983.1-P | Field mustard | cytosol | 35.48 | 35.99 |
| AT2G34670.2 | Thale cress | nucleus | 35.48 | 35.73 |
| CDX79570 | Canola | cytosol | 35.05 | 35.56 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 32.48 | 33.88 |
| KRH12768 | Soybean | cytosol | 30.19 | 33.6 |
| KRH37731 | Soybean | nucleus | 30.33 | 32.92 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 29.61 | 26.92 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 20.17 | 24.74 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 22.17 | 21.44 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 23.61 | 20.83 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 21.46 | 20.3 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 23.32 | 19.9 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 20.74 | 18.17 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 18.6 | 18.03 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 18.88 | 17.32 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 15.45 | 17.25 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 21.89 | 17.17 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 18.17 | 16.58 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 21.89 | 15.94 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 18.17 | 15.62 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 19.03 | 15.34 |
| TraesCS3B01G566500.1 | Wheat | plastid | 19.89 | 14.8 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G240800.1 | EnsemblPlantsGene:TraesCS3B01G240800 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF21 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | SUPFAM:SSF101447 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3B:+:379679756..379683038
Molecular Weight (calculated)
77686.0 Da
IEP (calculated)
5.514
GRAVY (calculated)
-0.580
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCRHSKVED EEAVRRCRDR RNLMKQLVRR RVDLAAAHIT YLHALRNTGA TLRQFAEVET ASSHQSLPAA ASPPPPPPPP PPPPPPPPPP PAYSVTSSMP
101: PHSVTSSMPP SPFPPPLIPF SPIRIRTRKR DGELNGYDST DEDDDTDSCS TPLPPPPPPG MEWEYTDPIT MRPLDFLPSS LADRDDKEVE SQVTMDDDWV
201: ETNIEFDGQD ESVSGNADGI LRRVESHPAK SRVMGDENSS MVSSWVTKDS NSSVMAWVSD KSLVEIAKEI DEYFLKAAAS GTDVVILLDS ATGRLDPSEV
301: QVKKGKNSKS AKVFSTLSWS WSFKSVHANR ESSSDACGYG YHGKTLDKLY DEEQKLYQLV KDEEFARLEY RKYSSLLKKL ESGEHDRLQA EKVRENIEEL
401: QTRIMSLEEA VSLTCLTISK LRDEELYPQV IELAAGLVHM WRNMYECHEV QNHIAQQASL LGNQPGSEPT TDSHCYATSQ LEGEVSAWHN SFCNLITLQR
501: EYVTILNEWI GLTDCLPDND GFMRSSSGIR SLCGELEHAL KKLPEKVAAE AIKAFLSVIH SIVIQQAEER QLKKKSDNIQ SKFHAQLEKH SENAMQSSSQ
601: GSHARSYSVS KDDPKLDVFR KRVEEEKARY INSLRTSRAM TLNHLQTSLP NVFHALTGFS GVCVQAFEGI SRCSEAAAGA ASHSGAVSPA VSSCDDHPL
101: PHSVTSSMPP SPFPPPLIPF SPIRIRTRKR DGELNGYDST DEDDDTDSCS TPLPPPPPPG MEWEYTDPIT MRPLDFLPSS LADRDDKEVE SQVTMDDDWV
201: ETNIEFDGQD ESVSGNADGI LRRVESHPAK SRVMGDENSS MVSSWVTKDS NSSVMAWVSD KSLVEIAKEI DEYFLKAAAS GTDVVILLDS ATGRLDPSEV
301: QVKKGKNSKS AKVFSTLSWS WSFKSVHANR ESSSDACGYG YHGKTLDKLY DEEQKLYQLV KDEEFARLEY RKYSSLLKKL ESGEHDRLQA EKVRENIEEL
401: QTRIMSLEEA VSLTCLTISK LRDEELYPQV IELAAGLVHM WRNMYECHEV QNHIAQQASL LGNQPGSEPT TDSHCYATSQ LEGEVSAWHN SFCNLITLQR
501: EYVTILNEWI GLTDCLPDND GFMRSSSGIR SLCGELEHAL KKLPEKVAAE AIKAFLSVIH SIVIQQAEER QLKKKSDNIQ SKFHAQLEKH SENAMQSSSQ
601: GSHARSYSVS KDDPKLDVFR KRVEEEKARY INSLRTSRAM TLNHLQTSLP NVFHALTGFS GVCVQAFEGI SRCSEAAAGA ASHSGAVSPA VSSCDDHPL
001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.