Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G201000.1 | Wheat | nucleus | 93.34 | 94.66 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 92.79 | 94.09 |
| HORVU5Hr1G058240.4 | Barley | nucleus | 87.52 | 89.0 |
| Os09t0368900-00 | Rice | nucleus | 54.92 | 57.73 |
| Solyc04g054880.2.1 | Tomato | nucleus | 37.17 | 37.38 |
| CDY42005 | Canola | nucleus | 31.48 | 37.09 |
| CDX69386 | Canola | nucleus | 31.07 | 37.09 |
| PGSC0003DMT400053154 | Potato | nucleus | 36.75 | 36.91 |
| AT4G39790.1 | Thale cress | plastid | 31.76 | 34.86 |
| VIT_00s1403g00010.t01 | Wine grape | nucleus | 35.64 | 34.82 |
| KRG97595 | Soybean | cytosol | 31.35 | 34.19 |
| KRH59380 | Soybean | nucleus | 34.67 | 34.01 |
| KRH43215 | Soybean | nucleus | 34.95 | 34.01 |
| Bra011832.1-P | Field mustard | nucleus | 31.76 | 33.33 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 27.74 | 24.6 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 21.36 | 20.84 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 17.89 | 19.25 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 16.23 | 18.69 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 18.03 | 18.6 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 14.29 | 18.07 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 17.89 | 17.84 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 19.42 | 17.54 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 18.31 | 17.17 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 19.56 | 16.26 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 17.34 | 15.78 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 16.09 | 15.22 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 15.81 | 14.88 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 19.69 | 14.79 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 17.75 | 14.37 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 16.23 | 14.29 |
| TraesCS3B01G566500.1 | Wheat | plastid | 17.34 | 13.31 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G193300.1 | EnsemblPlantsGene:TraesCS5B01G193300 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF10 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5B:-:349179041..349185816
Molecular Weight (calculated)
79788.5 Da
IEP (calculated)
6.194
GRAVY (calculated)
-0.604
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTTASKQDR NTALQLCKGR LKHIEQAIDA RYALSAAHLS YEQSLRNVGV ALRQFVESHH EGDPDKSPRS SSALPSPLPP ADNSKISLLK VPRHSDISRL
101: RSEVSPSLTV TVNPSDGDAS FIKKGQPILT SVSPPLSPEF CPPWDFFEPN DVSENVATHV SENCEATLDD FGHADDFGHA DGRDQASSIK NTSQIAEVQE
201: QLGTHGCKDL DDNFEHLKSN RNDCNEIEIA DTDLPNDSSL HKEPDQVQTQ NVEGQNPTRT TDKRKIEAHS VDKVNVPKIS TEREEERGSS ITSVSKDFLS
301: DVKELERQFA RAAECCHGVS RMLETRKIRL SFSTKITGKP SCALSLSASL LCCNAGNVAS HESEQHVTKV IAWNRSLSSR SSSYKNPLFS AQKDDDPPES
401: ISDFVEEFCM ISGSHASSLD RLYAWEIKIY HELKNIESIQ QIYDEKCAQL SHQCARDADA RQVDKTRFTI KGLYSRLVVG TEVLYSISKT IEKLRDEELQ
501: PQLLELLQGQ TRMWRVLEEV HQMQQKITSP TDAKLPAMSP PSESRGHALM NLITELGVFY SSLAGWVDGY KNYVSGMHSW LQKCVVQPRD RSGGGNLTLS
601: PRQHLAPPLF VLLGDLSAGM SSLPSEESCD SIKNLAADLK KMYKHQAAEQ KKAAKKRSSD AGAERDKSSE TESEMATLQG GLTAMFDRLS KLSGAMASLA
701: ENVKREAEVA REAYAIGRRT E
101: RSEVSPSLTV TVNPSDGDAS FIKKGQPILT SVSPPLSPEF CPPWDFFEPN DVSENVATHV SENCEATLDD FGHADDFGHA DGRDQASSIK NTSQIAEVQE
201: QLGTHGCKDL DDNFEHLKSN RNDCNEIEIA DTDLPNDSSL HKEPDQVQTQ NVEGQNPTRT TDKRKIEAHS VDKVNVPKIS TEREEERGSS ITSVSKDFLS
301: DVKELERQFA RAAECCHGVS RMLETRKIRL SFSTKITGKP SCALSLSASL LCCNAGNVAS HESEQHVTKV IAWNRSLSSR SSSYKNPLFS AQKDDDPPES
401: ISDFVEEFCM ISGSHASSLD RLYAWEIKIY HELKNIESIQ QIYDEKCAQL SHQCARDADA RQVDKTRFTI KGLYSRLVVG TEVLYSISKT IEKLRDEELQ
501: PQLLELLQGQ TRMWRVLEEV HQMQQKITSP TDAKLPAMSP PSESRGHALM NLITELGVFY SSLAGWVDGY KNYVSGMHSW LQKCVVQPRD RSGGGNLTLS
601: PRQHLAPPLF VLLGDLSAGM SSLPSEESCD SIKNLAADLK KMYKHQAAEQ KKAAKKRSSD AGAERDKSSE TESEMATLQG GLTAMFDRLS KLSGAMASLA
701: ENVKREAEVA REAYAIGRRT E
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.