Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69386 | Canola | nucleus | 76.1 | 82.78 |
| CDY42005 | Canola | nucleus | 76.41 | 82.03 |
| Bra011832.1-P | Field mustard | nucleus | 78.69 | 75.25 |
| VIT_00s1403g00010.t01 | Wine grape | nucleus | 58.14 | 51.76 |
| KRG97595 | Soybean | cytosol | 51.9 | 51.59 |
| Solyc04g054880.2.1 | Tomato | nucleus | 55.4 | 50.77 |
| PGSC0003DMT400053154 | Potato | nucleus | 55.4 | 50.7 |
| GSMUA_Achr2P22150_001 | Banana | cytosol | 44.29 | 49.32 |
| KRH43215 | Soybean | nucleus | 55.56 | 49.26 |
| KRH59380 | Soybean | nucleus | 55.1 | 49.25 |
| GSMUA_Achr11P... | Banana | cytosol | 42.62 | 42.04 |
| Os05t0255800-01 | Rice | nucleus | 29.53 | 41.1 |
| Os05t0172300-01 | Rice | nucleus | 44.44 | 40.44 |
| EES08807 | Sorghum | nucleus | 43.84 | 40.06 |
| Zm00001d048891_P002 | Maize | nucleus | 44.14 | 38.87 |
| HORVU7Hr1G018230.3 | Barley | nucleus | 42.62 | 37.94 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 42.47 | 37.91 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 42.16 | 37.69 |
| Os09t0368900-00 | Rice | nucleus | 36.23 | 34.69 |
| HORVU5Hr1G058240.4 | Barley | nucleus | 35.77 | 33.15 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 35.46 | 32.77 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 35.31 | 32.63 |
| AT2G27090.2 | Thale cress | nucleus | 35.92 | 31.76 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 34.86 | 31.76 |
| AT4G30130.3 | Thale cress | nucleus | 25.11 | 22.76 |
| AT2G17110.1 | Thale cress | nucleus | 24.2 | 21.69 |
| AT2G19090.1 | Thale cress | nucleus | 24.35 | 19.66 |
| AT1G20530.1 | Thale cress | cytosol | 18.11 | 19.38 |
| AT5G25590.1 | Thale cress | nucleus | 21.77 | 18.45 |
| AT2G34670.2 | Thale cress | nucleus | 19.48 | 18.44 |
| AT1G77500.1 | Thale cress | nucleus | 24.66 | 18.43 |
| AT4G35240.1 | Thale cress | nucleus | 24.2 | 18.38 |
| AT1G21740.1 | Thale cress | cytosol | 26.64 | 18.36 |
| AT1G02110.1 | Thale cress | nucleus | 19.63 | 18.35 |
| AT3G51290.2 | Thale cress | cytosol | 21.46 | 17.67 |
| AT1G52320.5 | Thale cress | nucleus | 21.31 | 17.54 |
| AT3G60320.1 | Thale cress | nucleus | 19.94 | 16.46 |
| AT5G54480.1 | Thale cress | nucleus | 17.66 | 16.11 |
Protein Annotations
| MapMan:35.1 | EntrezGene:830137 | ProteinID:AEE87119.1 | ArrayExpress:AT4G39790 | EnsemblPlantsGene:AT4G39790 | RefSeq:AT4G39790 |
| TAIR:AT4G39790 | RefSeq:AT4G39790-TAIR-G | EnsemblPlants:AT4G39790.1 | TAIR:AT4G39790.1 | EMBL:AY735668 | EMBL:AY954864 |
| Unigene:At.51047 | ncoils:Coil | InterPro:DUF630 | InterPro:DUF632 | GO:GO:0003674 | GO:GO:0008150 |
| RefSeq:NP_195689.2 | PFAM:PF04782 | PFAM:PF04783 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF4 | UniProt:Q5XV54 | UniParc:UPI00004431CE | SEG:seg | : | : |
Description
BZIP transcription factor, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q5XV54]
Coordinates
chr4:-:18462190..18464982
Molecular Weight (calculated)
74200.6 Da
IEP (calculated)
7.428
GRAVY (calculated)
-0.619
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHSILEKMG CSNSKASMNK KNEPLHLCKE RKRFVKQAMD SRCALAAAHV SYIRSLRNIG ACLRQYAEAE TAHESSPSLT ATEPEKSPSH NSSYPDDSVD
101: SPLSHNSNPN PNPKPLFNLS YMKTETASST VTFTINPLSD GDDDLEVTMP AFSPPPPPRP RRPETSSWDY FDTCDDFDSF RFVGLSEQTE IDSECDAAVI
201: GLEKITSQGN VAKSGSETLQ DSSFKTKQRK QSCEDNDERE DPSEFITHRA KDFVSSMKDI EHKFFRASES GREVSRMLEV NKIRVGFADM TGKGNSIAFL
301: AALKRACCRG KSYSPVSQEP LSHQVTKVIV WKRTSSSRSS TSRNPLIQTS KEDHDDESGS DFIEEFCMIS GSHSSSLDRL YAWERKLYDE VKASEMIRKE
401: YDRKCEQLRN QFAKDHSAKS MDKTRAAAKD LHSRIRVAIQ SVESISKRIE RIRDDELHPQ LLEFLQGLIR MWKAMLECHH TQYITISLAY HCRHSSKTAH
501: ESVLKRRILA ELLEETECFG LSFVDLVHSM ASYVEALNGW LHNCVLLPQE RSTRNRRPWS PRRVLAPPIF VLCRDWSAGI KTLPSDELSG SIKGFSLDME
601: MLGEEKGGSL LVSDLSSVHS SLAKLLERLK KFSEASLKMY EDVKVKSEAA RVAYTNK
101: SPLSHNSNPN PNPKPLFNLS YMKTETASST VTFTINPLSD GDDDLEVTMP AFSPPPPPRP RRPETSSWDY FDTCDDFDSF RFVGLSEQTE IDSECDAAVI
201: GLEKITSQGN VAKSGSETLQ DSSFKTKQRK QSCEDNDERE DPSEFITHRA KDFVSSMKDI EHKFFRASES GREVSRMLEV NKIRVGFADM TGKGNSIAFL
301: AALKRACCRG KSYSPVSQEP LSHQVTKVIV WKRTSSSRSS TSRNPLIQTS KEDHDDESGS DFIEEFCMIS GSHSSSLDRL YAWERKLYDE VKASEMIRKE
401: YDRKCEQLRN QFAKDHSAKS MDKTRAAAKD LHSRIRVAIQ SVESISKRIE RIRDDELHPQ LLEFLQGLIR MWKAMLECHH TQYITISLAY HCRHSSKTAH
501: ESVLKRRILA ELLEETECFG LSFVDLVHSM ASYVEALNGW LHNCVLLPQE RSTRNRRPWS PRRVLAPPIF VLCRDWSAGI KTLPSDELSG SIKGFSLDME
601: MLGEEKGGSL LVSDLSSVHS SLAKLLERLK KFSEASLKMY EDVKVKSEAA RVAYTNK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.