Factsheet for AT1G77500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41788	Canola	nucleus	71.22	73.47
CDX88372	Canola	nucleus	68.6	73.0
Bra015667.1-P	Field mustard	nucleus	67.92	71.5
CDX87516	Canola	nucleus	34.47	67.33
AT1G21740.1	Thale cress	cytosol	70.42	64.95
PGSC0003DMT400045246	Potato	mitochondrion	15.93	53.64
VIT_18s0001g02480.t01	Wine grape	nucleus	45.73	51.54
KRH64648	Soybean	cytosol	48.24	50.66
KRH53256	Soybean	cytosol	48.12	50.24
GSMUA_Achr3P22040_001	Banana	cytosol	35.04	44.9
Solyc06g060270.2.1	Tomato	nucleus	47.44	41.12
GSMUA_Achr9P08510_001	Banana	nucleus	33.11	37.21
AT2G17110.1	Thale cress	nucleus	28.33	33.97
GSMUA_Achr3P19020_001	Banana	cytosol	31.85	33.94
TraesCS1A01G264800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.13	33.63
TraesCS1D01G265000.1	Wheat	nucleus	33.9	33.18
TraesCS1B01G275500.1	Wheat	nucleus	33.56	33.11
Os05t0425000-00	Rice	nucleus	32.76	32.54
EES19545	Sorghum	nucleus	33.22	32.37
Zm00001d038223_P001	Maize	cytosol	32.99	31.97
AT4G35240.1	Thale cress	nucleus	31.06	31.56
Os01t0960200-00	Rice	nucleus	9.44	30.97
HORVU3Hr1G110830.5	Barley	cytosol, nucleus	23.21	29.35
TraesCS3A01G503100.1	Wheat	cytosol	24.46	29.05
TraesCS3D01G509700.1	Wheat	plastid	29.47	28.15
KXG34164	Sorghum	plastid	29.58	28.02
AT1G20530.1	Thale cress	cytosol	19.34	27.69
Zm00001d011823_P002	Maize	plastid	28.21	27.62
TraesCS3B01G566500.1	Wheat	plastid	29.35	27.48
AT5G54480.1	Thale cress	nucleus	21.96	26.81
AT4G39790.1	Thale cress	plastid	18.43	24.66
AT4G30130.3	Thale cress	nucleus	20.02	24.28
AT2G27090.2	Thale cress	nucleus	20.36	24.09
AT2G19090.1	Thale cress	nucleus	20.71	22.36
AT2G34670.2	Thale cress	nucleus	16.61	21.04
AT1G02110.1	Thale cress	nucleus	16.15	20.2
AT3G51290.2	Thale cress	cytosol	17.52	19.3
AT5G25590.1	Thale cress	nucleus	16.84	19.1
AT1G52320.5	Thale cress	nucleus	16.95	18.67
AT3G60320.1	Thale cress	nucleus	16.72	18.47

Protein Annotations

MapMan:35.1	EntrezGene:844086	ProteinID:AAG51662.1	ProteinID:AEE35986.1	ArrayExpress:AT1G77500	EnsemblPlantsGene:AT1G77500
RefSeq:AT1G77500	TAIR:AT1G77500	RefSeq:AT1G77500-TAIR-G	EnsemblPlants:AT1G77500.1	TAIR:AT1G77500.1	Unigene:At.34465
EMBL:BT002322	ncoils:Coil	InterPro:DUF630	InterPro:DUF632	RefSeq:NP_177874.1	PFAM:PF04782
PFAM:PF04783	PO:PO:0000013	PO:PO:0000037	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR21450	PANTHER:PTHR21450:SF8	UniProt:Q9CAQ5
UniParc:UPI00000AC451	SEG:seg	:	:	:	:

Description

DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9CAQ5]

Coordinates

chr1:+:29121226..29125204

Molecular Weight (calculated)

98627.5 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.707

Length

879 amino acids

Sequence
(BLAST)

001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.