Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045246 | Potato | mitochondrion | 21.79 | 65.13 |
| KRH64648 | Soybean | cytosol | 55.0 | 51.25 |
| KRH53256 | Soybean | cytosol | 54.36 | 50.36 |
| CDY04672 | Canola | nucleus | 54.49 | 48.74 |
| CDY08177 | Canola | nucleus | 55.0 | 48.15 |
| Bra017947.1-P | Field mustard | nucleus | 56.41 | 47.98 |
| AT1G21740.1 | Thale cress | cytosol | 57.44 | 47.01 |
| VIT_07s0031g02650.t01 | Wine grape | cytosol | 21.15 | 46.74 |
| AT1G77500.1 | Thale cress | nucleus | 51.54 | 45.73 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 39.49 | 44.9 |
| Bra015667.1-P | Field mustard | nucleus | 46.54 | 43.47 |
| CDX88372 | Canola | nucleus | 46.03 | 43.46 |
| Solyc06g060270.2.1 | Tomato | nucleus | 56.28 | 43.29 |
| CDY41788 | Canola | nucleus | 46.15 | 42.25 |
| CDX87516 | Canola | nucleus | 24.23 | 42.0 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 38.85 | 38.75 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 38.33 | 36.24 |
| Os01t0960200-00 | Rice | nucleus | 12.44 | 36.19 |
| EES19545 | Sorghum | nucleus | 40.64 | 35.14 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 40.13 | 35.09 |
| Os05t0425000-00 | Rice | nucleus | 39.74 | 35.03 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 39.87 | 34.9 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 39.87 | 34.63 |
| Zm00001d038223_P001 | Maize | cytosol | 39.23 | 33.74 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 33.85 | 32.51 |
| Zm00001d011823_P002 | Maize | plastid | 32.82 | 28.51 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 25.13 | 28.2 |
| KXG34164 | Sorghum | plastid | 33.46 | 28.12 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 26.54 | 27.97 |
| TraesCS3D01G509700.1 | Wheat | plastid | 32.95 | 27.93 |
| TraesCS3B01G566500.1 | Wheat | plastid | 33.21 | 27.58 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 26.03 | 27.36 |
| VIT_03s0038g02660.t01 | Wine grape | nucleus | 21.67 | 25.96 |
| VIT_00s0434g00010.t01 | Wine grape | nucleus | 23.46 | 25.7 |
| VIT_00s0264g00010.t01 | Wine grape | nucleus | 23.46 | 25.24 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 24.23 | 24.64 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 11.15 | 22.83 |
| VIT_00s1403g00010.t01 | Wine grape | nucleus | 21.28 | 22.49 |
| VIT_04s0023g03760.t01 | Wine grape | mitochondrion | 17.82 | 22.17 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 16.92 | 20.25 |
| VIT_09s0002g04590.t01 | Wine grape | nucleus | 15.38 | 19.61 |
| VIT_04s0008g04200.t01 | Wine grape | cytosol | 15.9 | 17.54 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 18.85 | 17.4 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 10.13 | 16.77 |
Protein Annotations
| ArrayExpress:VIT_18s0001g02480 | EMBL:FN595227 | EnsemblPlants:VIT_18s0001g02480.t01 | EnsemblPlantsGene:VIT_18s0001g02480 | InterPro:DUF630 | InterPro:DUF632 |
| ncoils:Coil | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CCB45479 |
| ProteinID:CCB45479.1 | SEG:seg | UniParc:UPI000210A04A | UniProt:F6H0K7 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr18:+:2777880..2785087
Molecular Weight (calculated)
87019.9 Da
IEP (calculated)
6.484
GRAVY (calculated)
-0.723
Length
780 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGGSKVDD YPLVTLCRER KELIRAAAEH RYALASAHIS YFRSLKDVGD ALRRFVDEEL VIGATSPLDS PVLTLPSQEG KRKNRNKSGE NSGNNKGSSS
101: STSIPHTVSP HTPEEDAGEG SHLHLSSGSE SELGSSSGHI HIEDSPELER RYNSSPPMGW SPPGMNSYSY YMKSSPAPPN VVYEEVQRSP TENEQWGNSG
201: YAYPGYPYAN GGYYGDPHYN SQPSPRAAPP SPPSPKVSAW DFLNPFDSYD SVYPSYYSQS RYGSAAGSSP DSKEVREREG IPDLEDETEQ EVTKAVHQKE
301: KKLNDYVNRN SGEGTSRAVP VKRGEDNSWT VPSKKSENTQ SAQGREGKEI KSSPDTIVSK SSEEGSTKKK SVSFEEASVH DIESSKQSSM TTLSAHGTRD
401: LQEVVKEIRD EFETASGYGK EVSMLLEVGK LPYQPRGTDE ERLRIIYEKK CRRLRALDNG GAESSKIDAA QASIRKLLTK INVCIRAVDA ISGRIHKLRD
501: EELQPLLTEL IHGLIRMWKS MLKCHQKQFQ AILESKTRTL KARTGFRRDL ILRATVELEM ELLNWCTRFN NWVNIQKSYV ESLNGWLLRC LLHVPEETDD
601: GIVPFSPGRI GAPAIFVMCH DWYQSMERIS EAAVADALQD FAMKLHQLWD RQDGEQVQRL KADYLSKDFQ KRLKTLRMEM KRIDHEQDAL SEKTAVSIVA
701: SESGISPLDD LRVDLDSMRK RIAEERTGHK GAIKLVPAAA SASLQAGLIP IFEALENFTS EALKAHEQVR LQNTGEAQGN
101: STSIPHTVSP HTPEEDAGEG SHLHLSSGSE SELGSSSGHI HIEDSPELER RYNSSPPMGW SPPGMNSYSY YMKSSPAPPN VVYEEVQRSP TENEQWGNSG
201: YAYPGYPYAN GGYYGDPHYN SQPSPRAAPP SPPSPKVSAW DFLNPFDSYD SVYPSYYSQS RYGSAAGSSP DSKEVREREG IPDLEDETEQ EVTKAVHQKE
301: KKLNDYVNRN SGEGTSRAVP VKRGEDNSWT VPSKKSENTQ SAQGREGKEI KSSPDTIVSK SSEEGSTKKK SVSFEEASVH DIESSKQSSM TTLSAHGTRD
401: LQEVVKEIRD EFETASGYGK EVSMLLEVGK LPYQPRGTDE ERLRIIYEKK CRRLRALDNG GAESSKIDAA QASIRKLLTK INVCIRAVDA ISGRIHKLRD
501: EELQPLLTEL IHGLIRMWKS MLKCHQKQFQ AILESKTRTL KARTGFRRDL ILRATVELEM ELLNWCTRFN NWVNIQKSYV ESLNGWLLRC LLHVPEETDD
601: GIVPFSPGRI GAPAIFVMCH DWYQSMERIS EAAVADALQD FAMKLHQLWD RQDGEQVQRL KADYLSKDFQ KRLKTLRMEM KRIDHEQDAL SEKTAVSIVA
701: SESGISPLDD LRVDLDSMRK RIAEERTGHK GAIKLVPAAA SASLQAGLIP IFEALENFTS EALKAHEQVR LQNTGEAQGN
001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9CAQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.