Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015690 | Potato | nucleus | 68.19 | 68.46 |
| Solyc07g047830.2.1 | Tomato | nucleus | 67.67 | 68.02 |
| KRH19063 | Soybean | nucleus | 65.19 | 66.76 |
| KRH12287 | Soybean | nucleus | 66.75 | 66.24 |
| KRH02818 | Soybean | nucleus | 63.49 | 65.37 |
| KRH37304 | Soybean | nucleus | 64.93 | 65.1 |
| CDY66508 | Canola | cytosol, nucleus | 34.94 | 63.36 |
| CDY28162 | Canola | cytosol | 32.86 | 62.38 |
| CDY28161 | Canola | nucleus | 16.04 | 60.0 |
| AT4G30130.3 | Thale cress | nucleus | 55.54 | 58.76 |
| Bra011166.1-P | Field mustard | nucleus | 50.59 | 58.52 |
| CDX68628 | Canola | nucleus | 50.85 | 57.69 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 45.76 | 56.16 |
| CDY39136 | Canola | nucleus | 53.59 | 54.58 |
| CDX82615 | Canola | nucleus | 53.45 | 54.38 |
| Bra038839.1-P | Field mustard | nucleus | 55.67 | 54.33 |
| AT2G19090.1 | Thale cress | nucleus | 57.37 | 54.05 |
| Bra038563.1-P | Field mustard | nucleus | 56.71 | 53.64 |
| Zm00001d012496_P001 | Maize | nucleus | 24.51 | 50.13 |
| Zm00001d046842_P001 | Maize | nucleus | 26.34 | 49.75 |
| Zm00001d046839_P001 | Maize | nucleus | 26.21 | 49.51 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 40.03 | 49.36 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 37.68 | 48.74 |
| Zm00001d013369_P001 | Maize | nucleus | 33.64 | 42.5 |
| OQU80872 | Sorghum | nucleus | 43.55 | 41.96 |
| Zm00001d031530_P006 | Maize | nucleus | 42.89 | 41.75 |
| Zm00001d049762_P007 | Maize | nucleus | 43.29 | 41.66 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 42.76 | 37.83 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 42.63 | 36.13 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 39.9 | 35.75 |
| EES06355 | Sorghum | cytosol | 28.16 | 35.24 |
| Os02t0175301-00 | Rice | nucleus | 17.21 | 35.2 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 20.08 | 34.84 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 38.2 | 34.84 |
| Zm00001d053766_P001 | Maize | cytosol | 28.29 | 34.72 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 28.29 | 34.39 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 27.9 | 34.19 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 27.9 | 33.81 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 13.43 | 32.7 |
| VIT_03s0038g02660.t01 | Wine grape | nucleus | 25.29 | 29.8 |
| VIT_07s0031g02650.t01 | Wine grape | cytosol | 12.91 | 28.05 |
| VIT_00s0434g00010.t01 | Wine grape | nucleus | 25.29 | 27.25 |
| VIT_00s0264g00010.t01 | Wine grape | nucleus | 25.29 | 26.76 |
| VIT_00s1403g00010.t01 | Wine grape | nucleus | 25.16 | 26.15 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 26.6 | 25.12 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 24.64 | 24.23 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 14.6 | 23.78 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 11.73 | 23.62 |
| VIT_04s0023g03760.t01 | Wine grape | mitochondrion | 19.3 | 23.6 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 22.69 | 23.45 |
| VIT_09s0002g04590.t01 | Wine grape | nucleus | 18.51 | 23.2 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 17.86 | 21.01 |
| VIT_04s0008g04200.t01 | Wine grape | cytosol | 17.99 | 19.52 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 19.56 | 17.75 |
Protein Annotations
| EntrezGene:100245404 | wikigene:100245404 | MapMan:35.1 | EMBL:AM448134 | ProteinID:CAN72045 | ProteinID:CAN72045.1 |
| ProteinID:CCB62267 | ProteinID:CCB62267.1 | InterPro:DUF630 | InterPro:DUF632 | UniProt:F6I5P9 | EMBL:FN596751 |
| EntrezGene:LOC100245404 | wikigene:LOC100245404 | PFAM:PF04782 | PFAM:PF04783 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| UniParc:UPI00019844CF | ArrayExpress:VIT_11s0103g00310 | EnsemblPlantsGene:VIT_11s0103g00310 | EnsemblPlants:VIT_11s0103g00310.t01 | RefSeq:XP_002266764 | RefSeq:XP_002266764.1 |
| RefSeq:XP_010656783.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:15968991..15972002
Molecular Weight (calculated)
85522.6 Da
IEP (calculated)
4.500
GRAVY (calculated)
-0.606
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSTSKLED EEAIQLCKDR KRFIKQAVEQ RARFASGHIA YIQSLRRVSA ALRDYIEGDE PRVFLLDSYI TPSFTPVKKT SSGFIPISSK SFSATPIQSE
101: PNSSLKVNYL RPGGNPAVVV EERPQSPETG RVETYPPMHH LGIDGFFAMQ SSPMHSSFFS YTPNNRPNLA PPSPQTSQWD FFWNPFSTLD YYGYPNSSSL
201: DQPAMDDEIM GIRQVREEEG IPDLEEETEQ EETERKIDIS EERDDIDMNF VREEVIVEDA DDEDDEDEDE DEDEDDDDDD ADSGIEMEHE VKGLRSQGSG
301: SIRLSEGQGQ VEIGNQETAV SDQKSKEETP GFTVYVNRRP TSMAEVIKDL EEQFMIVCNS ANEVSALLEA TRAQYASTSN ELSGMKMLNP VALIRSASSR
401: SSSSRFLMNS SSSRDEGYES SSDVSEESCM FSGSHQSTLD RLYAWEKKLY DEVKSGEKIR IAYERKCNRL RNQDVRGDDP SSVDKTRAGI RDLHTQIKVS
501: IHSVEAVSKR IEALRDEELQ PQLLELVQGL ARMWKVMAEC HQIQKRTLDE AKLLLAGTPS KIAEAKKQGA VSTTTTEPHR LARSAANLEA ELRNWKACFE
601: LWITSQRSYM RALAGWLLRC IRSGPGSPRR TSGAPPIFGI CTQWSRFLDD IHEVPVLEGL DFFATGVGSL YAQQLREDSR RAPGGSKRFG GGSGGSLEVV
701: EVGGVVEEEV MTAEKMAEVA IRVLCAGMSV AMSSLTEFAI GSAEGYANLV KQWDNTKWPR DSGEPGV
101: PNSSLKVNYL RPGGNPAVVV EERPQSPETG RVETYPPMHH LGIDGFFAMQ SSPMHSSFFS YTPNNRPNLA PPSPQTSQWD FFWNPFSTLD YYGYPNSSSL
201: DQPAMDDEIM GIRQVREEEG IPDLEEETEQ EETERKIDIS EERDDIDMNF VREEVIVEDA DDEDDEDEDE DEDEDDDDDD ADSGIEMEHE VKGLRSQGSG
301: SIRLSEGQGQ VEIGNQETAV SDQKSKEETP GFTVYVNRRP TSMAEVIKDL EEQFMIVCNS ANEVSALLEA TRAQYASTSN ELSGMKMLNP VALIRSASSR
401: SSSSRFLMNS SSSRDEGYES SSDVSEESCM FSGSHQSTLD RLYAWEKKLY DEVKSGEKIR IAYERKCNRL RNQDVRGDDP SSVDKTRAGI RDLHTQIKVS
501: IHSVEAVSKR IEALRDEELQ PQLLELVQGL ARMWKVMAEC HQIQKRTLDE AKLLLAGTPS KIAEAKKQGA VSTTTTEPHR LARSAANLEA ELRNWKACFE
601: LWITSQRSYM RALAGWLLRC IRSGPGSPRR TSGAPPIFGI CTQWSRFLDD IHEVPVLEGL DFFATGVGSL YAQQLREDSR RAPGGSKRFG GGSGGSLEVV
701: EVGGVVEEEV MTAEKMAEVA IRVLCAGMSV AMSSLTEFAI GSAEGYANLV KQWDNTKWPR DSGEPGV
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.