Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28162 | Canola | cytosol | 68.79 | 72.03 |
| Bra038563.1-P | Field mustard | nucleus | 99.76 | 52.03 |
| CDX82615 | Canola | nucleus | 88.89 | 49.87 |
| CDY39136 | Canola | nucleus | 88.65 | 49.8 |
| AT2G19090.1 | Thale cress | nucleus | 90.07 | 46.81 |
| CDX68628 | Canola | nucleus | 68.32 | 42.75 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 63.36 | 34.94 |
| PGSC0003DMT400015690 | Potato | nucleus | 61.47 | 34.03 |
| Solyc07g047830.2.1 | Tomato | nucleus | 61.23 | 33.95 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 49.17 | 33.28 |
| KRH37304 | Soybean | nucleus | 59.81 | 33.07 |
| KRH12287 | Soybean | nucleus | 59.81 | 32.73 |
| KRH02818 | Soybean | nucleus | 56.97 | 32.35 |
| KRH19063 | Soybean | nucleus | 56.74 | 32.04 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 22.7 | 30.48 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 42.79 | 29.1 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 39.24 | 27.99 |
| Zm00001d046839_P001 | Maize | nucleus | 26.71 | 27.83 |
| Zm00001d046842_P001 | Maize | nucleus | 26.71 | 27.83 |
| Zm00001d012496_P001 | Maize | nucleus | 21.99 | 24.8 |
| OQU80872 | Sorghum | nucleus | 42.55 | 22.61 |
| Zm00001d031530_P006 | Maize | nucleus | 42.08 | 22.59 |
| Zm00001d049762_P007 | Maize | nucleus | 42.32 | 22.46 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 31.68 | 21.41 |
| Zm00001d053766_P001 | Maize | cytosol | 31.44 | 21.28 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 31.68 | 21.17 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 31.21 | 20.92 |
| EES06355 | Sorghum | cytosol | 30.26 | 20.88 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 41.84 | 20.42 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 41.61 | 19.45 |
| CDX69386 | Canola | nucleus | 27.66 | 19.37 |
| CDY42005 | Canola | nucleus | 27.66 | 19.12 |
| Zm00001d013369_P001 | Maize | nucleus | 27.19 | 18.95 |
| CDX87081 | Canola | nucleus | 23.64 | 18.73 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 37.59 | 18.57 |
| CDY04477 | Canola | nucleus | 29.55 | 17.39 |
| CDX71474 | Canola | nucleus | 29.31 | 17.25 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 17.73 | 16.97 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 32.86 | 16.53 |
| CDY31475 | Canola | nucleus | 22.46 | 15.78 |
| CDX76322 | Canola | cytosol | 25.53 | 15.28 |
| CDY17530 | Canola | cytosol | 25.3 | 15.07 |
| CDX75484 | Canola | cytosol, plastid | 24.82 | 15.06 |
| CDX88008 | Canola | nucleus | 24.59 | 14.55 |
| CDX77992 | Canola | nucleus | 21.51 | 14.47 |
| CDY07877 | Canola | cytosol | 24.11 | 14.27 |
| CDX73734 | Canola | nucleus | 21.51 | 14.22 |
| CDX69122 | Canola | nucleus | 25.06 | 14.11 |
| CDX88193 | Canola | nucleus | 23.4 | 13.43 |
| CDX80528 | Canola | nucleus | 22.93 | 13.23 |
| CDX83412 | Canola | nucleus | 20.8 | 13.08 |
| CDY04672 | Canola | nucleus | 26.95 | 13.07 |
| CDX88372 | Canola | nucleus | 25.06 | 12.83 |
| CDY08177 | Canola | nucleus | 26.95 | 12.79 |
| CDY41788 | Canola | nucleus | 25.77 | 12.79 |
| CDY42691 | Canola | nucleus | 21.75 | 12.72 |
| CDX95620 | Canola | nucleus | 20.8 | 12.66 |
| CDY56992 | Canola | nucleus | 21.75 | 12.65 |
| CDX71821 | Canola | nucleus | 21.04 | 12.54 |
| CDY41178 | Canola | nucleus | 21.28 | 12.48 |
| CDX84637 | Canola | cytosol | 19.62 | 12.37 |
| CDY61085 | Canola | nucleus | 21.75 | 12.33 |
| CDY52975 | Canola | nucleus | 21.28 | 12.05 |
| CDY42454 | Canola | cytosol | 19.62 | 11.84 |
| CDY18335 | Canola | cytosol | 19.62 | 11.74 |
| CDX79570 | Canola | cytosol | 18.91 | 11.61 |
| Os02t0175301-00 | Rice | nucleus | 9.22 | 10.4 |
| CDY29526 | Canola | peroxisome | 23.4 | 8.62 |
| CDX87516 | Canola | nucleus | 2.6 | 2.44 |
| CDY28161 | Canola | nucleus | 1.18 | 2.44 |
Protein Annotations
| EnsemblPlants:CDY66508 | EnsemblPlantsGene:GSBRNA2T00054459001 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 | PFAM:PF04782 |
| ProteinID:CDY66508 | ProteinID:CDY66508.1 | SEG:seg | UniParc:UPI0004EEABA1 | UniProt:A0A078JFW3 | MapMan:35.1 |
Description
BnaAnng22380DBnaAnng22380D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JFW3]
Coordinates
chrLK035299:-:16200..17703
Molecular Weight (calculated)
47370.3 Da
IEP (calculated)
7.750
GRAVY (calculated)
-0.456
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: PTSMAEVIKD LEDQFTTICD AAKEVSGLLE ASRAQYAPSP NDHSAMKKLN PVALFRSGSS RSSSSRFLLT SSGGSGSESR SDVSDESCMV SGSHQTTLDK
101: LFAWEKKLYD EVKSGERVRR AYEKKCMQLR NQDVKGDDPF AVDKTRATIR DLNTQIKVSI HSIESISKRI ETLRDQELLP QLLELVHGLT RMWQVMAESH
201: QIQRRTLDEA KMLLAGAPVS KRHKKRQPPV MPEAINSQRL AQSALNLEAH LRNWRACFEF WITSQRSYMA ALSGWLLRCL RCDPDPEKVR LSSCPHPIYR
301: VCIQWSKLLN SLEEKPVLDK LEFFASGMGS VYARQVREDP SWSGSGGSRR YSGSESLDLV LAEDVVMTPE KLAEVAVKVL CHGMSVAVSS LAEFAIYSAD
401: EHSKLVNQPE DTSGQRPDVN FNS
101: LFAWEKKLYD EVKSGERVRR AYEKKCMQLR NQDVKGDDPF AVDKTRATIR DLNTQIKVSI HSIESISKRI ETLRDQELLP QLLELVHGLT RMWQVMAESH
201: QIQRRTLDEA KMLLAGAPVS KRHKKRQPPV MPEAINSQRL AQSALNLEAH LRNWRACFEF WITSQRSYMA ALSGWLLRCL RCDPDPEKVR LSSCPHPIYR
301: VCIQWSKLLN SLEEKPVLDK LEFFASGMGS VYARQVREDP SWSGSGGSRR YSGSESLDLV LAEDVVMTPE KLAEVAVKVL CHGMSVAVSS LAEFAIYSAD
401: EHSKLVNQPE DTSGQRPDVN FNS
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.