Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G182400.1 | Wheat | cytosol | 95.72 | 96.49 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 95.4 | 95.1 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 61.81 | 88.24 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 35.34 | 70.79 |
| EES06355 | Sorghum | cytosol | 67.35 | 69.33 |
| Zm00001d053766_P001 | Maize | cytosol | 66.24 | 66.88 |
| Os02t0175301-00 | Rice | nucleus | 35.82 | 60.27 |
| CDY28161 | Canola | nucleus | 10.46 | 32.2 |
| CDY66508 | Canola | cytosol, nucleus | 20.92 | 31.21 |
| KRH02818 | Soybean | nucleus | 35.66 | 30.2 |
| KRH19063 | Soybean | nucleus | 35.34 | 29.77 |
| CDY28162 | Canola | cytosol | 18.7 | 29.21 |
| KRH37304 | Soybean | nucleus | 35.34 | 29.15 |
| KRH12287 | Soybean | nucleus | 35.34 | 28.85 |
| Bra011166.1-P | Field mustard | nucleus | 30.27 | 28.81 |
| PGSC0003DMT400015690 | Potato | nucleus | 34.39 | 28.4 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 34.39 | 28.29 |
| CDX68628 | Canola | nucleus | 30.27 | 28.25 |
| Solyc07g047830.2.1 | Tomato | nucleus | 34.07 | 28.18 |
| AT4G30130.3 | Thale cress | nucleus | 31.54 | 27.45 |
| CDY39136 | Canola | nucleus | 32.17 | 26.96 |
| CDX82615 | Canola | nucleus | 32.17 | 26.92 |
| Bra038839.1-P | Field mustard | nucleus | 32.65 | 26.21 |
| AT2G19090.1 | Thale cress | nucleus | 33.6 | 26.04 |
| Bra038563.1-P | Field mustard | nucleus | 33.28 | 25.89 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 31.85 | 23.48 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 22.82 | 19.28 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 16.01 | 17.84 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 20.76 | 17.17 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 18.7 | 16.6 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 14.26 | 16.57 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 19.65 | 16.29 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 20.92 | 16.2 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 18.38 | 15.76 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 22.19 | 15.7 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 18.38 | 15.68 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 17.27 | 15.64 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 18.54 | 15.21 |
| TraesCS3A01G198900.1 | Wheat | nucleus | 19.02 | 14.8 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 18.54 | 14.75 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 22.19 | 14.6 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 16.32 | 14.13 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 20.13 | 13.54 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G154500.2 | EnsemblPlantsGene:TraesCS6A01G154500 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6A:+:143374251..143376529
Molecular Weight (calculated)
68552.3 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.470
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSSSKKLD EEEAVKACHD RRSFVKKAIA QRDLLASSHV AYLQSLRRVS LALFYCLAED EHLYFLQDTS AQCTHRPCSP EKRAVLLVVN RLRQGGAPVH
101: PLVGRWDGEA GAAEAAVVDG FFGVDPRLFR PPANDVPVSS PSHLPSAWDV FWVDPFSSLP TDRVGYVNHG VQEANADQED GEMPELEEIS EDGSNGEGES
201: EEEEAPGHEQ AEAAQVVVEP RERKEKKKVA GVSNKLRVRA SAEVEQQSTP GRFTVFVDRP PASVAEAMRD IKGHFSKVAE TAGEVSVLLE VVPYQKKVRP
301: PAPRGDVEGD DGGEQVGARE PSPEPFQLFQ SHKESLDRLY AWEKKLYEEV RAGERVRLSY EKKVAQLRSQ DANGAEPFAI ERTRAAIRDL RTKLNISLAS
401: VDAVSRRIVA VRDDELLPQL AELIRGLARM WRVIGDAHRV MKRTADEASA LLSSSAAGAE GGIRGPPPPP GPTRAATAAG ALATELRGWR AALEAWAESQ
501: RGYAAALWGW ARSCVKDGED MPRQIVAWAR AVEAVDVDAA IRAVEGVAAE AAAIATAARR RNSSAEEEPP NEEEGKRRVC VGLAAALGAI AEAGGLASAA
601: YRELVAEMDD REREAEMAGR DDEPSIQNNP P
101: PLVGRWDGEA GAAEAAVVDG FFGVDPRLFR PPANDVPVSS PSHLPSAWDV FWVDPFSSLP TDRVGYVNHG VQEANADQED GEMPELEEIS EDGSNGEGES
201: EEEEAPGHEQ AEAAQVVVEP RERKEKKKVA GVSNKLRVRA SAEVEQQSTP GRFTVFVDRP PASVAEAMRD IKGHFSKVAE TAGEVSVLLE VVPYQKKVRP
301: PAPRGDVEGD DGGEQVGARE PSPEPFQLFQ SHKESLDRLY AWEKKLYEEV RAGERVRLSY EKKVAQLRSQ DANGAEPFAI ERTRAAIRDL RTKLNISLAS
401: VDAVSRRIVA VRDDELLPQL AELIRGLARM WRVIGDAHRV MKRTADEASA LLSSSAAGAE GGIRGPPPPP GPTRAATAAG ALATELRGWR AALEAWAESQ
501: RGYAAALWGW ARSCVKDGED MPRQIVAWAR AVEAVDVDAA IRAVEGVAAE AAAIATAARR RNSSAEEEPP NEEEGKRRVC VGLAAALGAI AEAGGLASAA
601: YRELVAEMDD REREAEMAGR DDEPSIQNNP P
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.