Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68628 | Canola | nucleus | 90.24 | 27.37 |
| AT4G30130.3 | Thale cress | nucleus | 77.56 | 21.93 |
| Os02t0175301-00 | Rice | nucleus | 34.15 | 18.67 |
| CDY39136 | Canola | nucleus | 68.29 | 18.59 |
| CDX82615 | Canola | nucleus | 67.8 | 18.43 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 60.0 | 16.04 |
| KRH37304 | Soybean | nucleus | 58.05 | 15.56 |
| KRH12287 | Soybean | nucleus | 57.56 | 15.27 |
| KRH19063 | Soybean | nucleus | 55.12 | 15.09 |
| Solyc07g047830.2.1 | Tomato | nucleus | 55.12 | 14.81 |
| PGSC0003DMT400015690 | Potato | nucleus | 55.12 | 14.79 |
| KRH02818 | Soybean | nucleus | 53.66 | 14.77 |
| Zm00001d013369_P001 | Maize | nucleus | 43.41 | 14.66 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 31.22 | 14.48 |
| CDX87516 | Canola | nucleus | 28.29 | 12.89 |
| Zm00001d012496_P001 | Maize | nucleus | 22.93 | 12.53 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 37.56 | 12.38 |
| Zm00001d046842_P001 | Maize | nucleus | 23.9 | 12.07 |
| Zm00001d046839_P001 | Maize | nucleus | 23.9 | 12.07 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 36.1 | 11.84 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 33.17 | 11.47 |
| OQU80872 | Sorghum | nucleus | 44.39 | 11.43 |
| EES06355 | Sorghum | cytosol | 34.15 | 11.42 |
| Zm00001d049762_P007 | Maize | nucleus | 44.39 | 11.42 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 45.85 | 11.18 |
| Zm00001d031530_P006 | Maize | nucleus | 42.93 | 11.17 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 32.68 | 10.7 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 44.39 | 10.63 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 32.2 | 10.46 |
| Zm00001d053766_P001 | Maize | cytosol | 31.71 | 10.4 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 31.71 | 10.27 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 42.93 | 10.15 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 43.9 | 9.94 |
| CDX88008 | Canola | nucleus | 30.24 | 8.67 |
| CDY17530 | Canola | cytosol | 29.76 | 8.59 |
| CDX76322 | Canola | cytosol | 27.8 | 8.06 |
| CDY07877 | Canola | cytosol | 26.83 | 7.69 |
| CDY31475 | Canola | nucleus | 21.46 | 7.31 |
| CDX88372 | Canola | nucleus | 28.78 | 7.14 |
| CDX69122 | Canola | nucleus | 25.85 | 7.06 |
| CDY41788 | Canola | nucleus | 29.27 | 7.04 |
| CDY42005 | Canola | nucleus | 20.49 | 6.86 |
| CDY04672 | Canola | nucleus | 28.29 | 6.65 |
| CDX69386 | Canola | nucleus | 19.51 | 6.62 |
| CDY42454 | Canola | cytosol | 22.44 | 6.56 |
| CDY08177 | Canola | nucleus | 28.29 | 6.51 |
| CDY18335 | Canola | cytosol | 21.95 | 6.36 |
| CDX75484 | Canola | cytosol, plastid | 21.46 | 6.31 |
| CDX84637 | Canola | cytosol | 20.49 | 6.26 |
| CDX71474 | Canola | nucleus | 21.95 | 6.26 |
| CDY04477 | Canola | nucleus | 21.95 | 6.26 |
| CDX73734 | Canola | nucleus | 19.51 | 6.25 |
| CDX77992 | Canola | nucleus | 19.02 | 6.2 |
| CDX79570 | Canola | cytosol | 20.49 | 6.1 |
| CDX83412 | Canola | nucleus | 18.05 | 5.5 |
| CDX80528 | Canola | nucleus | 19.02 | 5.32 |
| CDX88193 | Canola | nucleus | 19.02 | 5.29 |
| CDY41178 | Canola | nucleus | 18.54 | 5.27 |
| CDY42691 | Canola | nucleus | 18.54 | 5.26 |
| CDX95620 | Canola | nucleus | 17.56 | 5.18 |
| CDX71821 | Canola | nucleus | 17.56 | 5.07 |
| CDX87081 | Canola | nucleus | 13.17 | 5.06 |
| CDY56992 | Canola | nucleus | 17.56 | 4.95 |
| CDY29526 | Canola | peroxisome | 21.95 | 3.92 |
| CDY61085 | Canola | nucleus | 14.15 | 3.89 |
| CDY52975 | Canola | nucleus | 13.66 | 3.75 |
| CDY28162 | Canola | cytosol | 2.44 | 1.24 |
| CDY66508 | Canola | cytosol, nucleus | 2.44 | 1.18 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 0.49 | 0.32 |
Protein Annotations
| EnsemblPlants:CDY28161 | EnsemblPlantsGene:GSBRNA2T00039869001 | InterPro:DUF630 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 | PFAM:PF04783 |
| ProteinID:CDY28161 | ProteinID:CDY28161.1 | SEG:seg | UniParc:UPI0004EDE3F7 | UniProt:A0A078GRT0 | MapMan:35.2 |
Description
BnaA01g06880DBnaA01g06880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRT0]
Coordinates
chrLK032216:+:9943..10560
Molecular Weight (calculated)
23448.3 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.725
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSNSKLGE DEAVQICRDR KRFIKQAVEL RTSFASAHIA YIHSLRKVSE ALREYIEGDE PHEFVSPVKR MSSGFIELSP SSKAIQNKVE SNLEVSCLMA
101: SGTRPVQVEE KPPRSPETYH VETYGADSFL GMNMNNSPNI PPPSPHNSQW DFFWNPFSSL DYYGYNYDNR RGMEDEVRRV REEEGIPDLE EDESSPRCFK
201: IIITS
101: SGTRPVQVEE KPPRSPETYH VETYGADSFL GMNMNNSPNI PPPSPHNSQW DFFWNPFSSL DYYGYNYDNR RGMEDEVRRV REEEGIPDLE EDESSPRCFK
201: IIITS
001: MGCSHSKFDD DEAVQICKDR KRFIKQAVEH RTGFASGHIA YIQSLRKVSD ALREYIEGDE PHEFMLDTCV TPVKRMSSSG GFIEISPPSK MVQSEAESKL
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGYAKTSFL
501: FPENICFSLT DNGILQISSD VESDGRVSPD TEANIGRSQT ITCNHTF
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGYAKTSFL
501: FPENICFSLT DNGILQISSD VESDGRVSPD TEANIGRSQT ITCNHTF
Arabidopsis Description
DUF630 family protein (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9SZW6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.