Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82615 | Canola | nucleus | 97.34 | 97.21 |
| Bra038839.1-P | Field mustard | nucleus | 98.94 | 94.78 |
| CDY66508 | Canola | cytosol, nucleus | 49.8 | 88.65 |
| AT2G19090.1 | Thale cress | nucleus | 83.67 | 77.4 |
| CDY28162 | Canola | cytosol | 38.25 | 71.29 |
| CDY28161 | Canola | nucleus | 18.59 | 68.29 |
| CDX68628 | Canola | nucleus | 59.36 | 66.12 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 54.58 | 53.59 |
| PGSC0003DMT400015690 | Potato | nucleus | 52.06 | 51.31 |
| KRH02818 | Soybean | nucleus | 50.73 | 51.28 |
| KRH19063 | Soybean | nucleus | 51.0 | 51.27 |
| Solyc07g047830.2.1 | Tomato | nucleus | 51.93 | 51.25 |
| KRH37304 | Soybean | nucleus | 51.39 | 50.59 |
| KRH12287 | Soybean | nucleus | 51.79 | 50.45 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 40.11 | 48.32 |
| Zm00001d046839_P001 | Maize | nucleus | 23.9 | 44.34 |
| Zm00001d046842_P001 | Maize | nucleus | 23.9 | 44.34 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 36.12 | 43.73 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 33.73 | 42.83 |
| Zm00001d012496_P001 | Maize | nucleus | 21.25 | 42.67 |
| Zm00001d013369_P001 | Maize | nucleus | 30.54 | 37.89 |
| OQU80872 | Sorghum | nucleus | 38.78 | 36.68 |
| Zm00001d049762_P007 | Maize | nucleus | 38.65 | 36.51 |
| Zm00001d031530_P006 | Maize | nucleus | 38.11 | 36.42 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 20.32 | 34.62 |
| EES06355 | Sorghum | cytosol | 26.96 | 33.12 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 37.98 | 32.99 |
| Zm00001d053766_P001 | Maize | cytosol | 27.36 | 32.96 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 27.09 | 32.59 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 27.22 | 32.39 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 26.96 | 32.17 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 36.52 | 32.13 |
| Os02t0175301-00 | Rice | nucleus | 15.8 | 31.73 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 37.98 | 31.6 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 34.53 | 30.92 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 12.09 | 28.89 |
| CDX69386 | Canola | nucleus | 20.32 | 25.33 |
| CDY42005 | Canola | nucleus | 20.58 | 25.33 |
| CDX88008 | Canola | nucleus | 23.77 | 25.04 |
| CDX76322 | Canola | cytosol | 23.11 | 24.61 |
| CDY17530 | Canola | cytosol | 23.11 | 24.51 |
| CDY31475 | Canola | nucleus | 19.12 | 23.92 |
| CDY07877 | Canola | cytosol | 22.44 | 23.64 |
| CDX87081 | Canola | nucleus | 16.73 | 23.6 |
| CDX71474 | Canola | nucleus | 21.78 | 22.81 |
| CDY04477 | Canola | nucleus | 21.78 | 22.81 |
| CDX75484 | Canola | cytosol, plastid | 20.85 | 22.53 |
| CDX69122 | Canola | nucleus | 22.44 | 22.5 |
| CDX77992 | Canola | nucleus | 18.33 | 21.94 |
| CDX73734 | Canola | nucleus | 18.33 | 21.56 |
| CDY04672 | Canola | nucleus | 24.17 | 20.87 |
| CDX88372 | Canola | nucleus | 22.71 | 20.7 |
| CDY08177 | Canola | nucleus | 24.17 | 20.43 |
| CDY41788 | Canola | nucleus | 22.97 | 20.31 |
| CDX88193 | Canola | nucleus | 19.12 | 19.54 |
| CDY18335 | Canola | cytosol | 18.33 | 19.52 |
| CDY42454 | Canola | cytosol | 18.06 | 19.4 |
| CDX80528 | Canola | nucleus | 18.86 | 19.37 |
| CDX84637 | Canola | cytosol | 17.13 | 19.23 |
| CDX83412 | Canola | nucleus | 16.73 | 18.72 |
| CDX79570 | Canola | cytosol | 16.73 | 18.29 |
| CDY42691 | Canola | nucleus | 17.53 | 18.26 |
| CDY56992 | Canola | nucleus | 17.53 | 18.16 |
| CDX71821 | Canola | nucleus | 17.0 | 18.03 |
| CDX87516 | Canola | nucleus | 10.76 | 18.0 |
| CDY41178 | Canola | nucleus | 17.13 | 17.89 |
| CDX95620 | Canola | nucleus | 16.33 | 17.7 |
| CDY61085 | Canola | nucleus | 16.6 | 16.76 |
| CDY52975 | Canola | nucleus | 16.33 | 16.47 |
| CDY29526 | Canola | peroxisome | 19.52 | 12.79 |
Protein Annotations
| EnsemblPlants:CDY39136 | EnsemblPlantsGene:GSBRNA2T00067310001 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY39136 | ProteinID:CDY39136.1 | SEG:seg | UniParc:UPI0004EE218F |
| UniProt:A0A078HNG1 | MapMan:35.1 | : | : | : | : |
Description
BnaA07g01320DBnaA07g01320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNG1]
Coordinates
chrLK032441:-:115486..118110
Molecular Weight (calculated)
84883.3 Da
IEP (calculated)
8.722
GRAVY (calculated)
-0.675
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSHSKLDD EESVQICKDR KRFIKQAIEH RTKFASSHIA YIQSLRKVSD ALHDFIQGDN YKPPHDFLQD SFVTPVKRLP PSRSHRRSSS RSGGGGGGGE
101: FITISPSSMP PAKMIQDKPR TKVRASYLMA NRTRPVRVEE RSPETFRVES FSPPPSHEAD GFFGMNMNMN MNTSAASSSS FWNPLSSPEQ QRLSTHNIPP
201: PSPQNSQWDF FWNPFSSLDY YGYNNSYDRG SVDNNRSGGM DDEIRGLRRV REEEGIPDLE EDDEPQPPQP VRFHTPKVVV EESKSYEKCV GKKEQRAVEV
301: PRVETTGSVV VEEVKNVVNV AKRETPGFTV YVNRRPTSMA EVIKDLEDQF TTICDAAKEV SGLLEASRAQ YAPSSSDHSA MKKLNPVALF RSGSSRSSSS
401: RFLLTSSSGG SKESGSESRS DGSDESCMVS GSHQTTLDKL FAWEKKLYDE VKSGERVRRA YEKKCMQLRN QDVKGDDPFA VDKTRATIRD LDTQIKVSIH
501: SIESISKRIE TLRDQELLPQ LLELVKGLTR MWQVMAESHQ IQKRTLDEAK MLLAGTPVSK RHKKRQQQQP SIMPETINSQ RLAQSALNLE AQLRNWRGCF
601: EFWITSQRSY MTALSGWLLR CLRCDPDPDK VRLSSCPHPI YRVCIQWSRL LNSLNEKPVL DKLEFFASGM GSVYARQVRE DPNWSGGGSR RYSGSESLDL
701: VLADRVGEED VVMTAEKLAE VAVKVLCHGM SVAVSSLADL LTNQRKLLTP SRM
101: FITISPSSMP PAKMIQDKPR TKVRASYLMA NRTRPVRVEE RSPETFRVES FSPPPSHEAD GFFGMNMNMN MNTSAASSSS FWNPLSSPEQ QRLSTHNIPP
201: PSPQNSQWDF FWNPFSSLDY YGYNNSYDRG SVDNNRSGGM DDEIRGLRRV REEEGIPDLE EDDEPQPPQP VRFHTPKVVV EESKSYEKCV GKKEQRAVEV
301: PRVETTGSVV VEEVKNVVNV AKRETPGFTV YVNRRPTSMA EVIKDLEDQF TTICDAAKEV SGLLEASRAQ YAPSSSDHSA MKKLNPVALF RSGSSRSSSS
401: RFLLTSSSGG SKESGSESRS DGSDESCMVS GSHQTTLDKL FAWEKKLYDE VKSGERVRRA YEKKCMQLRN QDVKGDDPFA VDKTRATIRD LDTQIKVSIH
501: SIESISKRIE TLRDQELLPQ LLELVKGLTR MWQVMAESHQ IQKRTLDEAK MLLAGTPVSK RHKKRQQQQP SIMPETINSQ RLAQSALNLE AQLRNWRGCF
601: EFWITSQRSY MTALSGWLLR CLRCDPDPDK VRLSSCPHPI YRVCIQWSRL LNSLNEKPVL DKLEFFASGM GSVYARQVRE DPNWSGGGSR RYSGSESLDL
701: VLADRVGEED VVMTAEKLAE VAVKVLCHGM SVAVSSLADL LTNQRKLLTP SRM
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.