Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66508 | Canola | cytosol, nucleus | 46.81 | 90.07 |
| Bra038563.1-P | Field mustard | nucleus | 83.66 | 83.97 |
| CDY39136 | Canola | nucleus | 77.4 | 83.67 |
| Bra038839.1-P | Field mustard | nucleus | 80.59 | 83.46 |
| CDX82615 | Canola | nucleus | 77.27 | 83.42 |
| AT4G30130.3 | Thale cress | nucleus | 65.6 | 73.66 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 54.05 | 57.37 |
| PGSC0003DMT400015690 | Potato | nucleus | 52.33 | 55.76 |
| Solyc07g047830.2.1 | Tomato | nucleus | 52.09 | 55.57 |
| KRH12287 | Soybean | nucleus | 51.97 | 54.72 |
| KRH02818 | Soybean | nucleus | 49.88 | 54.5 |
| KRH19063 | Soybean | nucleus | 50.12 | 54.47 |
| KRH37304 | Soybean | nucleus | 51.11 | 54.38 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 38.57 | 50.24 |
| Zm00001d046839_P001 | Maize | nucleus | 22.85 | 45.81 |
| Zm00001d046842_P001 | Maize | nucleus | 22.85 | 45.81 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 34.52 | 45.18 |
| Zm00001d012496_P001 | Maize | nucleus | 20.39 | 44.27 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 31.45 | 43.17 |
| Zm00001d013369_P001 | Maize | nucleus | 28.62 | 38.39 |
| Zm00001d049762_P007 | Maize | nucleus | 37.47 | 38.27 |
| OQU80872 | Sorghum | nucleus | 37.35 | 38.19 |
| Zm00001d031530_P006 | Maize | nucleus | 36.0 | 37.18 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 19.16 | 35.29 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 37.1 | 34.83 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 26.41 | 34.34 |
| Zm00001d053766_P001 | Maize | cytosol | 26.17 | 34.08 |
| EES06355 | Sorghum | cytosol | 25.55 | 33.93 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 26.17 | 33.65 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 35.38 | 33.64 |
| Os02t0175301-00 | Rice | nucleus | 15.48 | 33.6 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 26.04 | 33.6 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 36.85 | 33.15 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 33.54 | 32.46 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 11.18 | 28.89 |
| AT2G17110.1 | Thale cress | nucleus | 22.48 | 24.97 |
| AT2G27090.2 | Thale cress | nucleus | 22.24 | 24.36 |
| AT4G39790.1 | Thale cress | plastid | 19.66 | 24.35 |
| AT1G20530.1 | Thale cress | cytosol | 18.3 | 24.27 |
| AT4G35240.1 | Thale cress | nucleus | 24.2 | 22.77 |
| AT5G54480.1 | Thale cress | nucleus | 18.43 | 20.83 |
| AT1G77500.1 | Thale cress | nucleus | 22.36 | 20.71 |
| AT1G21740.1 | Thale cress | cytosol | 23.59 | 20.15 |
| AT1G02110.1 | Thale cress | nucleus | 17.2 | 19.91 |
| AT2G34670.2 | Thale cress | nucleus | 16.71 | 19.6 |
| AT5G25590.1 | Thale cress | nucleus | 18.06 | 18.97 |
| AT3G60320.1 | Thale cress | nucleus | 18.06 | 18.47 |
| AT3G51290.2 | Thale cress | cytosol | 17.94 | 18.3 |
| AT1G52320.5 | Thale cress | nucleus | 16.83 | 17.17 |
Protein Annotations
| ArrayExpress:AT2G19090 | EnsemblPlants:AT2G19090.1 | EnsemblPlantsGene:AT2G19090 | EntrezGene:816426 | InterPro:DUF630 | InterPro:DUF632 |
| PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:AEC06847.1 | ProteinID:OAP09447.1 |
| RefSeq:AT2G19090 | RefSeq:AT2G19090-TAIR-G | RefSeq:NP_179499.2 | SEG:seg | TAIR:AT2G19090 | TAIR:AT2G19090.1 |
| UniParc:UPI000034ED3C | UniProt:A0A178VSN2 | UniProt:F4ISE7 | MapMan:35.2 | : | : |
Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
Coordinates
chr2:-:8264974..8268416
Molecular Weight (calculated)
91823.2 Da
IEP (calculated)
5.552
GRAVY (calculated)
-0.748
Length
814 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.