Factsheet for Bra038839.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39136	Canola	nucleus	94.78	98.94
Bra038563.1-P	Field mustard	nucleus	86.01	83.35
AT2G19090.1	Thale cress	nucleus	83.46	80.59
Bra011166.1-P	Field mustard	nucleus	56.74	67.27
VIT_11s0103g00310.t01	Wine grape	nucleus	54.33	55.67
PGSC0003DMT400015690	Potato	nucleus	51.78	53.27
Solyc07g047830.2.1	Tomato	nucleus	51.53	53.08
KRH02818	Soybean	nucleus	50.25	53.02
KRH19063	Soybean	nucleus	50.38	52.87
KRH12287	Soybean	nucleus	51.53	52.39
KRH37304	Soybean	nucleus	50.76	52.16
GSMUA_Achr7P16020_001	Banana	nucleus	38.04	47.84
Zm00001d046839_P001	Maize	nucleus	23.03	44.58
Zm00001d046842_P001	Maize	nucleus	23.03	44.58
GSMUA_Achr3P00490_001	Banana	nucleus	34.86	44.05
GSMUA_Achr7P04930_001	Banana	nucleus	32.7	43.34
Zm00001d012496_P001	Maize	nucleus	20.48	42.93
Zm00001d013369_P001	Maize	nucleus	29.26	37.89
OQU80872	Sorghum	nucleus	38.04	37.56
Zm00001d049762_P007	Maize	nucleus	37.66	37.14
Zm00001d031530_P006	Maize	nucleus	36.64	36.55
HORVU0Hr1G015650.2	Barley	cytosol, nucleus	19.85	35.29
EES06355	Sorghum	cytosol	26.59	34.09
TraesCS7B01G137800.1	Wheat	nucleus	37.28	33.79
Zm00001d053766_P001	Maize	cytosol	26.84	33.76
TraesCS6B01G182400.1	Wheat	cytosol	26.34	33.07
TraesCS6D01G144300.1	Wheat	cytosol	26.46	32.86
TraesCS7A01G252800.1	Wheat	nucleus	35.75	32.83
TraesCS6A01G154500.2	Wheat	cytosol	26.21	32.65
Os02t0175301-00	Rice	nucleus	15.52	32.53
TraesCS7D01G251500.1	Wheat	cytosol	37.28	32.38
HORVU7Hr1G052210.21	Barley	cytosol	33.72	31.51
Os02t0175200-00	Rice	cytosol, mitochondrion	11.58	28.89
Bra009665.1-P	Field mustard	cytosol	22.9	25.46
Bra020807.1-P	Field mustard	nucleus	23.03	23.72
Bra012035.1-P	Field mustard	nucleus	21.12	23.02
Bra011832.1-P	Field mustard	nucleus	19.59	22.42
Bra015667.1-P	Field mustard	nucleus	23.54	22.16
Bra011597.1-P	Field mustard	nucleus	23.28	21.89
Bra036821.1-P	Field mustard	nucleus	17.56	21.56
Bra017947.1-P	Field mustard	nucleus	23.79	20.39
Bra002985.1-P	Field mustard	nucleus	18.07	19.61
Bra009853.1-P	Field mustard	nucleus	18.07	19.32
Bra022983.1-P	Field mustard	cytosol	16.67	19.01
Bra007523.1-P	Field mustard	nucleus	16.41	17.84
Bra014497.1-P	Field mustard	nucleus	17.05	17.59
Bra000365.1-P	Field mustard	nucleus	17.18	16.83
Bra018963.1-P	Field mustard	nucleus	16.03	16.8
Bra025823.1-P	Field mustard	peroxisome	18.83	12.89

Protein Annotations

EnsemblPlants:Bra038839.1	EnsemblPlants:Bra038839.1-P	EnsemblPlantsGene:Bra038839	InterPro:DUF630	InterPro:DUF632	PANTHER:PTHR21450
PANTHER:PTHR21450:SF3	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002541085	UniProt:M4FCM0
MapMan:35.1	:	:	:	:	:

Description

AT2G19090 (E=1e-280) | unknown protein

Coordinates

chrA07:+:1131033..1133611

Molecular Weight (calculated)

88469.9 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.707

Length

786 amino acids

Sequence
(BLAST)

001: MGCSHSKLDD EESVQICKDR KRFIKQAIEH RTKFASSHIA YIQSLRKVSD ALHDFIQGDN YKPPHDFLQD SFVTPVKRLP PSRSHRRSSS RSGGGGGGGE
101: FITISPSSMP PAKMIQDKPR TKVRASYLMA NRTRPVRVEE RSPETFCVES FSPPPSHEAD GFFGMNMNMN MNTSAASSSS FWNPLSSPEQ QRLSTHNIPP
201: PSPQNSQWDF FWNPFSSLDY YGYNNSYDRG SVDNNRSGGM DDEIRGLRRV REEEGIPDLE EDDEPQPPQP VRFHTPKVVV EESKSCCKEE VKVEDVDDND
301: DDDEFTDSGC EESENEGDEK CVGKQEQRTV EVPTVETTGS VVVEEVKNVV NIAKRETPGF TVYVNRRPTS MAEVIKDLED QFTTICDAAK EVSGLLEASR
401: AQYAPSSSDH SAMKKLNPVA LFRSGSSRSS SSRFLLTSSS GGSKESGSES RSDGSDESCM VSGSHQTTLD KLFAWEKKLY DEVKSGERVR RAYEKKCMQL
501: RNQDVKGDDP FAVDKTRSTI RDLDTQIKVS IHSIESISKR IETLRDQELL PQLLELVKGL TRMWQVMAES HQIQKRTLDE AKMLLAGTPV SKRHKKRQQQ
601: QPSIMPETIN SQRLAQSALN LEAQLRNWRG CFEFWITSQR SYMTALSGWL LRCLRCDPDP DKVRLSSCPH PIYRVCIQWS RLLNSLNEKP VLDKLEFFAS
701: GMGSVYARQV REDPNWSGGG SRRYSGSESL DLVLADRVGE EDVVMTAEKL AEVAVKVLCH GMSVAVSSLA ESLLTNQRKL LTPSRM

Best Arabidopsis Sequence Match ( AT2G19090.1 )
(BLAST)

001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.