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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76322 Canola cytosol 92.4 99.72
Bra011597.1-P Field mustard nucleus 83.75 76.44
AT4G35240.1 Thale cress nucleus 84.01 74.1
Bra009665.1-P Field mustard cytosol 60.03 64.78
KRH14028 Soybean cytosol 50.85 52.93
KRH74089 Soybean cytosol 53.47 52.11
VIT_03s0038g03260.t01 Wine grape cytosol 52.29 49.14
Solyc10g074470.1.1 Tomato cytosol 50.72 48.19
PGSC0003DMT400043330 Potato mitochondrion 50.59 47.83
Solyc01g112050.2.1 Tomato nucleus 51.9 44.49
PGSC0003DMT400048013 Potato nucleus 52.56 43.92
Os02t0669900-01 Rice cytosol 23.85 42.62
GSMUA_Achr1P18120_001 Banana cytosol 35.91 40.29
GSMUA_Achr3P14690_001 Banana nucleus 37.09 40.2
HORVU2Hr1G096140.2 Barley cytosol 19.4 39.57
Os04t0562800-00 Rice cytosol, mitochondrion 28.18 39.23
GSMUA_Achr7P04020_001 Banana cytosol 35.26 38.43
GSMUA_Achr11P... Banana mitochondrion 33.03 37.5
OQU85656 Sorghum cytosol 36.83 36.68
Zm00001d017553_P001 Maize cytosol 35.65 36.12
TraesCS6D01G235200.1 Wheat nucleus 35.65 35.65
HORVU6Hr1G064670.13 Barley nucleus 35.39 35.53
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, nucleus 30.67 35.51
TraesCS6A01G253600.1 Wheat nucleus 35.39 35.39
TraesCS6B01G271800.1 Wheat nucleus 35.26 35.3
HORVU7Hr1G057760.4 Barley cytosol 30.01 34.96
Os08t0551200-00 Rice cytosol 36.96 34.81
TraesCS2D01G402400.1 Wheat cytosol 34.47 34.65
HORVU2Hr1G096180.1 Barley cytosol 27.79 34.64
TraesCS2A01G405700.1 Wheat cytosol 34.21 34.3
TraesCS7D01G273600.1 Wheat cytosol 36.3 34.2
TraesCS2B01G423500.1 Wheat cytosol 34.21 34.07
EER97130 Sorghum nucleus 40.63 33.95
KXG26898 Sorghum cytosol 35.26 33.92
Os09t0547300-01 Rice nucleus 40.76 33.84
Zm00001d002669_P002 Maize cytosol 34.99 33.84
Zm00001d006286_P001 Maize nucleus 39.97 33.37
TraesCS7B01G171500.1 Wheat cytosol 34.6 33.08
Zm00001d026130_P001 Maize nucleus 34.21 33.08
Zm00001d021452_P001 Maize nucleus 40.76 33.05
TraesCS5B01G348100.1 Wheat nucleus 40.37 32.08
TraesCS5D01G353500.1 Wheat nucleus 40.37 31.95
TraesCS5A01G347200.1 Wheat nucleus 40.1 31.91
HORVU5Hr1G086500.2 Barley nucleus 40.24 31.71
Bra015667.1-P Field mustard nucleus 33.68 30.78
Bra017947.1-P Field mustard nucleus 35.26 29.33
TraesCS7A01G273600.1 Wheat cytosol, mitochondrion, nucleus 35.65 29.0
Bra011166.1-P Field mustard nucleus 22.41 25.79
Bra002985.1-P Field mustard nucleus 22.94 24.17
Bra036821.1-P Field mustard nucleus 19.53 23.28
Bra038839.1-P Field mustard nucleus 23.72 23.03
Bra011832.1-P Field mustard nucleus 20.71 23.0
Bra038563.1-P Field mustard nucleus 24.12 22.69
Bra012035.1-P Field mustard nucleus 20.05 21.22
Bra009853.1-P Field mustard nucleus 18.61 19.32
Bra022983.1-P Field mustard cytosol 17.17 19.01
Bra007523.1-P Field mustard nucleus 17.43 18.4
Bra014497.1-P Field mustard nucleus 17.96 17.98
Bra018963.1-P Field mustard nucleus 17.3 17.6
Bra000365.1-P Field mustard nucleus 18.22 17.33
Bra025823.1-P Field mustard peroxisome 25.56 16.99
Protein Annotations
EnsemblPlants:Bra020807.1EnsemblPlants:Bra020807.1-PEnsemblPlantsGene:Bra020807InterPro:DUF630InterPro:DUF632ncoils:Coil
PANTHER:PTHR21450PANTHER:PTHR21450:SF2PFAM:PF04782PFAM:PF04783SEG:segUniParc:UPI0002545FF3
UniProt:M4DWB3MapMan:35.1::::
Description
AT4G35240 (E=5e-238) | unknown protein
Coordinates
chrA08:+:12017861..12020386
Molecular Weight (calculated)
85558.5 Da
IEP (calculated)
5.671
GRAVY (calculated)
-0.746
Length
763 amino acids
Sequence
(BLAST)
001: MGCTSSKLDD LPAVALCRER CNFLEAAIQQ RYDLAESHVA YTHSLKGIGH SLHLFINHHH RCVGDSPRLN LPPQRKGHPE EQENKGVEHS PKKPKLPSPH
101: HPGSGTDSGH LEFDSDSEDD DDEEDHLDLD HHHHLGNFET GPYMGSQPGY TRYPNPEMMG TPYMHMNYMK NSSMPPSLIY EQRPSCPQKV YIGESGPGPG
201: YYGSSTDAPS SKPPPPPPSP PRSNGWDFLN PFDTYYPSYT PSRDSRELRE EEGIPELEED DDSQYEVVKE VHGRDNQPTP AVVYREESDS PSPSPRLSVD
301: KSGASTSGGD AAMYQTRPSV SVEKNGVEYE VHVVEKTVVE DGGNESNATA TRGGGGGGPR AVPEVAKEIE NQFVRAAESG SEIAKLLEVG KRPYGRKHAA
401: SKLLHGVTPS VAEPPTYAGI EEELASRSRN LSSTLHKLHL WEKKLYREVK AEEKLRVAHE KKVRKLKRLD ERGAEATKVD TTRKLVRDMN TKIRIAIQVV
501: DKISVTINKI RDEDLWPQLN ALIQGLTRMW KEMLECHQSQ CQAIKEARGL GSIRASKKLG DEHLEATSLL GHELINWILG FSSWVSAQKC YVRELNKWLM
601: KCLLYEPEET ADGIAPFSPG RLGAPPIFVI CNQWSQALDR ISEKEVIEAM RSFTTSVLQL WEQDRLETTV MGQEKVRSMD REEQRIHREI QALEKKMVLV
701: APGDGLLVSG NVVYQSDTSS DSLQGSLQRI FEAMERFTDE CMRAYDDLLV RAEEVTAPRE SEE
Best Arabidopsis Sequence Match ( AT4G35240.1 )
(BLAST)
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEEILGF ARLRLGQKAP FRMMI
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.