Factsheet for HORVU6Hr1G064670.13

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G271800.1	Wheat	nucleus	92.63	92.39
TraesCS6A01G253600.1	Wheat	nucleus	92.5	92.14
TraesCS6D01G235200.1	Wheat	nucleus	91.84	91.48
Os02t0669900-01	Rice	cytosol	43.82	77.99
Zm00001d017553_P001	Maize	cytosol	68.82	69.46
OQU85656	Sorghum	cytosol	68.95	68.41
HORVU2Hr1G096140.2	Barley	cytosol	30.39	61.76
HORVU2Hr1G096180.1	Barley	cytosol	42.37	52.61
GSMUA_Achr11P...	Banana	mitochondrion	37.37	42.26
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	35.0	40.36
CDX76322	Canola	cytosol	34.47	37.06
CDY17530	Canola	cytosol	34.08	36.48
AT2G17110.1	Thale cress	nucleus	34.74	36.02
Bra009665.1-P	Field mustard	cytosol	33.42	35.93
CDY07877	Canola	cytosol	33.68	35.8
CDX88008	Canola	nucleus	33.55	35.66
CDX75484	Canola	cytosol, plastid	32.5	35.44
Bra020807.1-P	Field mustard	nucleus	35.53	35.39
KRH14028	Soybean	cytosol	33.68	34.92
HORVU7Hr1G057760.4	Barley	cytosol	29.61	34.35
PGSC0003DMT400043330	Potato	mitochondrion	36.32	34.2
Solyc10g074470.1.1	Tomato	cytosol	36.05	34.12
KRH74089	Soybean	cytosol	35.0	33.97
CDX69122	Canola	nucleus	33.42	33.82
Bra011597.1-P	Field mustard	nucleus	36.84	33.49
AT4G35240.1	Thale cress	nucleus	37.37	32.83
VIT_03s0038g03260.t01	Wine grape	cytosol	34.61	32.39
Solyc01g112050.2.1	Tomato	nucleus	36.71	31.35
PGSC0003DMT400048013	Potato	nucleus	37.37	31.11
HORVU5Hr1G086500.2	Barley	nucleus	38.95	30.58
VIT_18s0001g00170.t01	Wine grape	cytosol	29.74	30.46
KRH60958	Soybean	cytosol	26.05	29.91
KRH51633	Soybean	cytosol	25.53	29.22
CDY31475	Canola	nucleus	21.45	27.08
AT1G20530.1	Thale cress	cytosol	21.58	26.71
HORVU3Hr1G110830.5	Barley	cytosol, nucleus	20.26	22.16
HORVU5Hr1G084030.15	Barley	nucleus	19.61	21.98
HORVU0Hr1G015650.2	Barley	cytosol, nucleus	12.63	21.72
HORVU5Hr1G084580.2	Barley	cytosol	20.79	21.67
HORVU6Hr1G062350.2	Barley	plastid	15.92	21.19
HORVU7Hr1G018230.3	Barley	nucleus	19.21	19.78
HORVU3Hr1G050880.1	Barley	nucleus	16.84	18.39
HORVU5Hr1G058240.4	Barley	nucleus	16.18	17.35
HORVU4Hr1G052040.1	Barley	cytosol	16.71	15.28
HORVU7Hr1G052210.21	Barley	cytosol	16.71	15.1
Bra025823.1-P	Field mustard	peroxisome	21.97	14.55
CDY29526	Canola	peroxisome	21.84	14.45
HORVU3Hr1G042920.6	Barley	cytosol, nucleus	15.53	13.44

Protein Annotations

EMBL:AK366324	EnsemblPlants:HORVU6Hr1G064670.13	EnsemblPlantsGene:HORVU6Hr1G064670	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF16	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI00020073B6
UniProt:F2DR06	MapMan:35.1	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DR06]

Coordinates

chrchr6H:-:440819092..440823694

Molecular Weight (calculated)

83177.1 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.401

Length

760 amino acids

Sequence
(BLAST)

001: MGCKGSKLDE QEAVALCRGR ADLLAVAVRH RDALGAAHAA LAGSLLSVSS SLHILLVSAS ARPRTGLTLP AAVKTVDPPA PPQPSSPPHS SSHIDFAPSS
101: GSDSGSVASS PPRRVDDARH DQLHHPHALH FPHYGYGYGY GYEHEPPFGY PPGSLQLYYA RSRPPPASVA VEQRAPASER VYFGSSDPAG GHARYHSYGG
201: EAAAAGRTAA PPPSPPRASS WDFFNVFDDY QVHDNYCYDA AGAGTTATTP YTPSRCSRDV REEEGIPELE EDDAVVKEVS SEHYMGGSGG ARSRRSSVGG
301: MSSSEEENCV VDKGVLAGGG VSRQQAPAQP NVAASVPTHR KSYGSADIAG EIKAQFVRAA DAVWAVAPIL EVERRSYQYH PRSSVYHVSS RMVSTAAMPN
401: SGHRGEELDV GGWKKVAEGG KSLSVTLQKL YIWEKKLYNE VKSEEKMRLL LAKNSKRLKF LDQKGSEAQK IDATQNLVRK LSAKIRMAVR VIAKVSKKID
501: RVRDEELWPQ IMALIQGFVI MWKEKLECYQ IQCEAISGAK NLDSAISGWI SRDLAMELEV DLVKWIVNFC SWVNAQRSFV KALNGWLALC LNYQQEETPD
601: GAAPYSPGRV GAPLVFVIGN TWSQAMDRIS EKEVVAAMKA LVTSVRNQCE HRAAAEQSEL IFVTREREKW NRILERKSVE INREADTLNR KLALVPGRQS
701: LLPTAQTYQA HFLEADSLQV SLSRVLQALE SFASSSLQAF RETLRHAEEE MLSRETAKVS

Best Arabidopsis Sequence Match ( AT2G17110.1 )
(BLAST)

001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.