Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G253600.1 | Wheat | nucleus | 96.19 | 96.07 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 95.67 | 95.54 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 92.39 | 92.63 |
| Os02t0669900-01 | Rice | cytosol | 44.75 | 79.86 |
| Zm00001d017553_P001 | Maize | cytosol | 69.95 | 70.78 |
| OQU85656 | Sorghum | cytosol | 70.47 | 70.1 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 56.3 | 56.01 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.8 | 42.86 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 34.91 | 40.36 |
| CDX76322 | Canola | cytosol | 34.51 | 37.2 |
| CDY17530 | Canola | cytosol | 33.99 | 36.48 |
| Bra009665.1-P | Field mustard | cytosol | 33.6 | 36.21 |
| CDX88008 | Canola | nucleus | 33.86 | 36.08 |
| CDY07877 | Canola | cytosol | 33.6 | 35.8 |
| AT2G17110.1 | Thale cress | nucleus | 34.38 | 35.74 |
| CDX75484 | Canola | cytosol, plastid | 32.41 | 35.44 |
| Bra020807.1-P | Field mustard | nucleus | 35.3 | 35.26 |
| KRH14028 | Soybean | cytosol | 33.33 | 34.65 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 36.22 | 34.2 |
| Solyc10g074470.1.1 | Tomato | cytosol | 35.96 | 34.12 |
| KRH74089 | Soybean | cytosol | 34.91 | 33.97 |
| Bra011597.1-P | Field mustard | nucleus | 37.01 | 33.73 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 35.3 | 33.71 |
| CDX69122 | Canola | nucleus | 33.2 | 33.69 |
| AT4G35240.1 | Thale cress | nucleus | 37.01 | 32.6 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 34.51 | 32.39 |
| Solyc01g112050.2.1 | Tomato | nucleus | 36.48 | 31.24 |
| PGSC0003DMT400048013 | Potato | nucleus | 37.14 | 31.0 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 38.98 | 30.94 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 29.66 | 30.46 |
| KRH60958 | Soybean | cytosol | 25.46 | 29.31 |
| KRH51633 | Soybean | cytosol | 25.33 | 29.07 |
| CDY31475 | Canola | nucleus | 21.26 | 26.91 |
| AT1G20530.1 | Thale cress | cytosol | 21.39 | 26.55 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 28.08 | 24.02 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 21.13 | 21.79 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 18.37 | 20.9 |
| TraesCS3B01G566500.1 | Wheat | plastid | 25.46 | 20.66 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 16.8 | 20.45 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 14.57 | 19.47 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 17.32 | 18.88 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 18.5 | 18.34 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 20.08 | 17.65 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 16.27 | 17.15 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 15.22 | 16.09 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 17.06 | 15.99 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 15.62 | 15.03 |
| Bra025823.1-P | Field mustard | peroxisome | 21.78 | 14.46 |
| CDY29526 | Canola | peroxisome | 21.65 | 14.36 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 15.22 | 14.16 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G271800.1 | EnsemblPlantsGene:TraesCS6B01G271800 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF16 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6B:-:490258332..490262064
Molecular Weight (calculated)
83285.1 Da
IEP (calculated)
7.750
GRAVY (calculated)
-0.421
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCKGSKLDE QEAVALCRGR ADLLAVAVRH RDALGAAHAA LAGSLLSVSS SLHLLLVSAS ARPRPGITLP AAANAKAVDP PPAAQPSSPP HSSSHIDFAP
101: SSGSDSGSVA SSPPRRVDDA RHDQLHHPHP YALQFPHYGY GYSYEPEPPF GYPPGSLQLY YARSRPPPAS VAVEQRAPAS ERVYLGSSDP AGGNARYYSY
201: GGVTTPAGRA AAPPPSPPRA SSWDFFNVFD DYQVHDNYCY DAAGAGTTAT TPYTPSRCSR DVREEEGIPE LEEDDAVVKE VSSEHYMTGS GGARSRRSSV
301: GGMSSSEEEN CVVDKGVLSG GGMARQQAPA QPNVAASVRT HRKSSETADF AGEIKAQFVR AADAVWAVGP ILEVDRRSYQ YHPRSSVYHV SSRMVSTAAL
401: PNSGHGGDEL DVGGWKKVAE GGRSLSVTLQ KLYIWEKKLY NEVKSEEKMR LLLAKNSKRL KFLDQKGAEA QKIDATQNLV RKLSAKIRMA VRVIAKVSKK
501: INRVRDEELC PQIMALIQGF VKMWQEKLDC YQTQCEAISE AKNLDSAISG GISRDLAMEL EVDLVKWIVN FCSWVNAQRS FVKALNGWLA LCLNYQQEET
601: PDGAPPYSPG RVGAPLVFVI CNTWSQAMDR ISEKEVVTAM QALVSSVRNQ CEHRASVEQS ELIFVTRERE KWNRILERKS VEINREADTL NKKLALVPGR
701: QSLLPTAQTY QAHFLEADSL HVSLSRVLQS LESFASSSLQ AFRETLRHAE EEMLSRESAK VS
101: SSGSDSGSVA SSPPRRVDDA RHDQLHHPHP YALQFPHYGY GYSYEPEPPF GYPPGSLQLY YARSRPPPAS VAVEQRAPAS ERVYLGSSDP AGGNARYYSY
201: GGVTTPAGRA AAPPPSPPRA SSWDFFNVFD DYQVHDNYCY DAAGAGTTAT TPYTPSRCSR DVREEEGIPE LEEDDAVVKE VSSEHYMTGS GGARSRRSSV
301: GGMSSSEEEN CVVDKGVLSG GGMARQQAPA QPNVAASVRT HRKSSETADF AGEIKAQFVR AADAVWAVGP ILEVDRRSYQ YHPRSSVYHV SSRMVSTAAL
401: PNSGHGGDEL DVGGWKKVAE GGRSLSVTLQ KLYIWEKKLY NEVKSEEKMR LLLAKNSKRL KFLDQKGAEA QKIDATQNLV RKLSAKIRMA VRVIAKVSKK
501: INRVRDEELC PQIMALIQGF VKMWQEKLDC YQTQCEAISE AKNLDSAISG GISRDLAMEL EVDLVKWIVN FCSWVNAQRS FVKALNGWLA LCLNYQQEET
601: PDGAPPYSPG RVGAPLVFVI CNTWSQAMDR ISEKEVVTAM QALVSSVRNQ CEHRASVEQS ELIFVTRERE KWNRILERKS VEINREADTL NKKLALVPGR
701: QSLLPTAQTY QAHFLEADSL HVSLSRVLQS LESFASSSLQ AFRETLRHAE EEMLSRESAK VS
001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.