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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69122 Canola nucleus 85.51 79.36
Bra011597.1-P Field mustard nucleus 92.68 77.27
CDX76322 Canola cytosol 75.75 74.68
CDY17530 Canola cytosol 74.17 72.82
AT4G35240.1 Thale cress nucleus 80.77 65.09
CDX88008 Canola nucleus 61.84 60.28
CDY07877 Canola cytosol 60.55 59.02
KRH14028 Soybean cytosol 51.79 49.25
KRH74089 Soybean cytosol 54.09 48.15
Solyc10g074470.1.1 Tomato cytosol 52.51 45.58
PGSC0003DMT400043330 Potato mitochondrion 52.51 45.35
VIT_03s0038g03260.t01 Wine grape cytosol 52.22 44.83
Os02t0669900-01 Rice cytosol 26.4 43.09
Solyc01g112050.2.1 Tomato nucleus 53.08 41.57
PGSC0003DMT400048013 Potato nucleus 52.65 40.2
HORVU2Hr1G096140.2 Barley cytosol 21.52 40.11
Os04t0562800-00 Rice cytosol, mitochondrion 31.13 39.6
GSMUA_Achr3P14690_001 Banana nucleus 37.45 37.07
GSMUA_Achr7P04020_001 Banana cytosol 36.87 36.71
HORVU2Hr1G096180.1 Barley cytosol 30.42 34.64
GSMUA_Achr11P... Banana mitochondrion 33.29 34.52
HORVU7Hr1G057760.4 Barley cytosol 32.42 34.5
GSMUA_Achr1P18120_001 Banana cytosol 33.57 34.41
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, nucleus 31.28 33.08
OQU85656 Sorghum cytosol 35.72 32.51
TraesCS6D01G235200.1 Wheat nucleus 35.58 32.5
HORVU6Hr1G064670.13 Barley nucleus 35.44 32.5
TraesCS6B01G271800.1 Wheat nucleus 35.44 32.41
Zm00001d017553_P001 Maize cytosol 34.86 32.27
TraesCS6A01G253600.1 Wheat nucleus 35.29 32.24
TraesCS2D01G402400.1 Wheat cytosol 34.0 31.23
TraesCS2A01G405700.1 Wheat cytosol 33.72 30.88
Os09t0547300-01 Rice nucleus 40.6 30.79
EER97130 Sorghum nucleus 40.17 30.67
KXG26898 Sorghum cytosol 34.86 30.64
TraesCS2B01G423500.1 Wheat cytosol 33.57 30.55
Os08t0551200-00 Rice cytosol 35.29 30.37
Zm00001d002669_P002 Maize cytosol 34.29 30.29
Zm00001d006286_P001 Maize nucleus 39.45 30.09
TraesCS7D01G273600.1 Wheat cytosol 34.58 29.75
Zm00001d021452_P001 Maize nucleus 39.74 29.44
Zm00001d026130_P001 Maize nucleus 33.29 29.4
TraesCS7B01G171500.1 Wheat cytosol 33.29 29.07
TraesCS5B01G348100.1 Wheat nucleus 39.6 28.75
TraesCS5A01G347200.1 Wheat nucleus 39.45 28.68
TraesCS5D01G353500.1 Wheat nucleus 39.6 28.63
HORVU5Hr1G086500.2 Barley nucleus 39.74 28.62
CDY31475 Canola nucleus 23.96 27.74
CDX88372 Canola nucleus 32.71 27.6
CDY41788 Canola nucleus 33.57 27.46
CDY04672 Canola nucleus 33.0 26.38
CDY08177 Canola nucleus 33.43 26.15
TraesCS7A01G273600.1 Wheat cytosol, mitochondrion, nucleus 34.86 25.91
CDY28162 Canola cytosol 14.92 25.74
CDY66508 Canola cytosol, nucleus 15.06 24.82
CDX77992 Canola nucleus 20.23 22.42
CDX68628 Canola nucleus 21.52 22.19
CDY42454 Canola cytosol 22.24 22.11
CDX73734 Canola nucleus 20.23 22.03
CDY42005 Canola nucleus 19.23 21.9
CDX69386 Canola nucleus 18.94 21.85
CDY18335 Canola cytosol 22.09 21.78
CDY28161 Canola nucleus 6.31 21.46
CDX82615 Canola nucleus 22.67 20.95
CDY39136 Canola nucleus 22.53 20.85
CDX87516 Canola nucleus 13.06 20.22
CDX83412 Canola nucleus 19.37 20.06
CDX87081 Canola nucleus 15.35 20.04
CDY04477 Canola nucleus 19.94 19.33
CDX71474 Canola nucleus 19.37 18.78
CDX95620 Canola nucleus 18.65 18.7
CDY41178 Canola nucleus 18.79 18.17
CDX71821 Canola nucleus 18.51 18.17
CDY56992 Canola nucleus 18.94 18.16
CDX84637 Canola cytosol 17.22 17.88
CDY42691 Canola nucleus 18.51 17.84
CDX79570 Canola cytosol 16.79 16.98
CDX80528 Canola nucleus 17.79 16.92
CDX88193 Canola nucleus 17.65 16.69
CDY61085 Canola nucleus 17.07 15.95
CDY52975 Canola nucleus 17.07 15.93
CDY29526 Canola peroxisome 23.96 14.53
Protein Annotations
EnsemblPlants:CDX75484EnsemblPlantsGene:GSBRNA2T00121381001InterPro:DUF632ncoils:CoilPANTHER:PTHR21450PANTHER:PTHR21450:SF2
PFAM:PF04782ProteinID:CDX75484ProteinID:CDX75484.1SEG:segUniParc:UPI0004EEDD69MapMan:35.1
Description
BnaA01g02180D
Coordinates
chrLK031804:-:1330045..1333215
Molecular Weight (calculated)
77334.2 Da
IEP (calculated)
6.054
GRAVY (calculated)
-0.658
Length
697 amino acids
Sequence
(BLAST)
001: MGCTSSKLDD LPAESATPST SSSTTTTASS LPAALTAEEV TLRDSTSLLT EKATPTKINP LKNQNYLPVR VLTRQQQLPL PSYMHMNYMK NKSMPPSVIY
101: EQRPSSPQRV YEGESSSSSY NPYPPNNSGT TTKPPPPPPS PPRSNGWDFL NPFDTYYPPY TPSRDSRELR EEEGIPELEE DDSHYEVVKE VHGRPKFAAA
201: AAGEVPSPSP PPVVDKSGAS TSGGGDAAMY QSRPSVSVEK KGVEYEVHVV EKKTVVEDAG NEERRSNAAA PRGGGGPRAV HEVAKEIETQ FVKAAESGSE
301: IAKLLEVGKL PYGRKHVSKL LHPSLPLGGG SSAPAAAATA PPTYADIEEE LASRSRNLSS TLHKLHLWEK KLYHEVKAEE KLRVAHEKKL RKLKRLDERG
401: AEATKVDTTR KLVRDMSTKI RIAIQVVDKI SVTINKIRDE DLWPQLNALI QGLTTMWKTM LECHQTQCQA IREARGLGPI RASKKLGEEH LEATSLLGHE
501: LINWILGFSN WVSAQKGYVR ELNKWLMKCL LYEPEETPDG IAPFSPGRLG APPIFVICNQ WSQALDRISE KEVIEAMRSF TTSVLQLWEQ DRLETTTMGQ
601: GDSEKRGRNM DREEQRIHRE IQALEKKMVL VAPGDSLSLS GNVVYQSDTS NDSLQGSLQR IFEAMERFTG ESVRAYDDLL VRAEEETAPR EVESDED
Best Arabidopsis Sequence Match ( AT4G35240.3 )
(BLAST)
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.