CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026130_P001	Maize	nucleus	90.67	91.13
Zm00001d002669_P002	Maize	cytosol	89.91	90.37
HORVU2Hr1G096140.2	Barley	cytosol	33.67	71.39
Os04t0562800-00	Rice	cytosol, mitochondrion	47.29	68.43
TraesCS2B01G423500.1	Wheat	cytosol	63.93	66.19
TraesCS2D01G402400.1	Wheat	cytosol	63.18	66.01
TraesCS2A01G405700.1	Wheat	cytosol	62.67	65.31
HORVU2Hr1G096180.1	Barley	cytosol	48.05	62.25
OQU85656	Sorghum	cytosol	57.63	59.66
GSMUA_Achr11P...	Banana	mitochondrion	36.32	42.86
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	33.67	40.52
CDX76322	Canola	cytosol	32.79	36.78
Bra009665.1-P	Field mustard	cytosol	32.41	36.35
CDY17530	Canola	cytosol	32.41	36.2
CDX88008	Canola	nucleus	32.53	36.08
CDY07877	Canola	cytosol	32.28	35.8
AT2G17110.1	Thale cress	nucleus	33.04	35.74
Bra020807.1-P	Field mustard	nucleus	33.92	35.26
CDX75484	Canola	cytosol, plastid	30.64	34.86
VIT_03s0038g03260.t01	Wine grape	cytosol	34.93	34.11
Solyc10g074470.1.1	Tomato	cytosol	34.43	34.0
PGSC0003DMT400043330	Potato	mitochondrion	34.3	33.71
KRH14028	Soybean	cytosol	31.02	33.56
AT4G35240.1	Thale cress	nucleus	36.57	33.53
EER97130	Sorghum	nucleus	38.59	33.52
KRH74089	Soybean	cytosol	32.91	33.33
CDX69122	Canola	nucleus	31.4	33.16
Solyc01g112050.2.1	Tomato	nucleus	36.95	32.92
Bra011597.1-P	Field mustard	nucleus	34.3	32.54
PGSC0003DMT400048013	Potato	nucleus	37.07	32.2
VIT_18s0001g00170.t01	Wine grape	cytosol	28.63	30.59
KRH51633	Soybean	cytosol	25.35	30.27
KRH60958	Soybean	cytosol	25.22	30.21
CDY31475	Canola	nucleus	22.45	29.57
AT1G20530.1	Thale cress	cytosol	22.19	28.66
EER97113	Sorghum	cytosol	22.32	24.45
EES19545	Sorghum	nucleus	27.49	24.17
KXG36086	Sorghum	nucleus	17.02	20.58
KXG34164	Sorghum	plastid	23.46	20.04
OQU80872	Sorghum	nucleus	19.92	19.85
EES08807	Sorghum	nucleus	17.15	18.92
EES06355	Sorghum	cytosol	14.25	18.43
EES00973	Sorghum	nucleus	15.51	17.52
EER94480	Sorghum	nucleus	16.52	16.69
EES18173	Sorghum	nucleus	15.89	16.43
KXG39486	Sorghum	nucleus	16.77	16.02
KXG32552	Sorghum	nucleus	15.89	15.99
KXG31098	Sorghum	cytosol, plastid	11.6	15.89
OQU88702	Sorghum	cytosol	8.58	15.42
Bra025823.1-P	Field mustard	peroxisome	22.19	15.33
CDY29526	Canola	peroxisome	22.19	15.32

Protein Annotations

EnsemblPlants:KXG26898	EnsemblPlantsGene:SORBI_3006G178800	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF20	PFAM:PF04782	PFAM:PF04783	ProteinID:KXG26898	ProteinID:KXG26898.1	SEG:seg
UniParc:UPI00081ADE16	UniProt:A0A1B6PMJ0	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:53316409..53321121

Molecular Weight (calculated)

87512.2 Da

IEP (calculated)

8.732

GRAVY (calculated)

-0.499

Length

793 amino acids

Sequence
(BLAST)

001: MGCKGSKLDD QEAVALCRAR AELLAAAVRH RYALADAHAA LADSIESVAA PLHRLLRLQQ AAESPPGLTL PSARKGGGGA PASRLPRSFD TSSAHAHSSR
101: LQFGASPGSE PASSPAEADS PPRRVPEQLQ QPHPHPHYAA YGYEYDYATQ PAYAYPAPAG SLQFYYARSR PPPASVAVTQ RAPGPPERVR FGSFDAPGGY
201: PQHHYAYSAQ RAPAPPPAAL QRAAPPSPPK ASSWDFLNVF ENYDSYDSYY YDSATAAAAA AAPYTPSRSS REVREEEGIP DLEDDDDEDS LVVKEVAGQY
301: SAPGSGGARS RRSSLGGVSS TAELDQPENV IAHKDVIGEL RRRPTAHGNV SVHAPPPPAR RAVDNANVAG EIKAQLVRTA EAARQLAPML EVGRPSYQGR
401: SSVYQSSSKM MSAISVAHLG CKDMDVLDVG VVGKMVDTRS LSSALEKLYF WERKLYNEVK AEEKMRLLIA KNSKRLKLLD QKGAEPQKID ATRNLLRKLS
501: TKIRIAVRVI AKISRKINKL RDEELWPQVN ALIQGFVLMW HDKLDCYHSQ CQVISEAKNF TSVLSGGNGQ DLVLELEVEL IKWIISFSSW VNSQRNFVKA
601: LNGWLALCLN YEPEDNTTGV PPYSPGSIGA PLVFVTCNKW SQAMDRISEK DVVNTMQALV SSVRHLWEQQ HLEQSEQIIS IREREKWIKI LERKTQEINK
701: EADELNRKLA LIPSRQRLHV PRSVQLYEAH CVEASNLHIN LRLVLEALEN FAANSLQAFQ DVSKSAEGTR LPRDNVRREH HSSNRSLNYK TSS

Best Arabidopsis Sequence Match ( AT4G35240.3 )
(BLAST)

001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.