Factsheet for GSMUA_Achr11P01310_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	53.41	52.38
Os02t0669900-01	Rice	cytosol	28.83	44.5
HORVU2Hr1G096140.2	Barley	cytosol	23.22	40.91
Os04t0562800-00	Rice	cytosol, mitochondrion	32.17	38.69
GSMUA_Achr3P14690_001	Banana	nucleus	41.27	38.64
GSMUA_Achr7P04020_001	Banana	cytosol	40.06	37.71
Zm00001d017553_P001	Maize	cytosol	42.19	36.92
GSMUA_Achr1P18120_001	Banana	cytosol	37.94	36.76
OQU85656	Sorghum	cytosol	40.97	35.25
HORVU6Hr1G064670.13	Barley	nucleus	40.36	35.0
TraesCS6D01G235200.1	Wheat	nucleus	40.52	34.99
TraesCS6B01G271800.1	Wheat	nucleus	40.36	34.91
TraesCS6A01G253600.1	Wheat	nucleus	40.21	34.73
HORVU2Hr1G096180.1	Barley	cytosol	31.71	34.15
KXG26898	Sorghum	cytosol	40.52	33.67
TraesCS2A01G405700.1	Wheat	cytosol	38.85	33.64
TraesCS2B01G423500.1	Wheat	cytosol	39.0	33.55
Zm00001d002669_P002	Maize	cytosol	39.45	32.95
TraesCS2D01G402400.1	Wheat	cytosol	37.94	32.94
Zm00001d026130_P001	Maize	nucleus	39.3	32.83
CDX76322	Canola	cytosol	34.9	32.53
AT2G17110.1	Thale cress	nucleus	35.96	32.33
CDY17530	Canola	cytosol	34.75	32.25
CDX88008	Canola	nucleus	34.45	31.75
Bra009665.1-P	Field mustard	cytosol	33.84	31.54
KRH14028	Soybean	cytosol	35.05	31.51
VIT_03s0038g03260.t01	Wine grape	cytosol	38.7	31.4
CDX75484	Canola	cytosol, plastid	33.08	31.28
KRH74089	Soybean	cytosol	37.03	31.16
PGSC0003DMT400043330	Potato	mitochondrion	38.09	31.1
CDX69122	Canola	nucleus	35.2	30.89
Bra020807.1-P	Field mustard	nucleus	35.51	30.67
Solyc10g074470.1.1	Tomato	cytosol	37.33	30.64
CDY07877	Canola	cytosol	33.23	30.63
GSMUA_Achr3P22040_001	Banana	cytosol	31.71	30.47
AT4G35240.1	Thale cress	nucleus	38.39	29.25
Bra011597.1-P	Field mustard	nucleus	36.87	29.07
Solyc01g112050.2.1	Tomato	nucleus	39.15	28.99
PGSC0003DMT400048013	Potato	nucleus	39.61	28.59
KRH60958	Soybean	cytosol	28.53	28.4
KRH51633	Soybean	cytosol	28.53	28.31
VIT_18s0001g00170.t01	Wine grape	cytosol	31.87	28.3
CDY31475	Canola	nucleus	25.8	28.24
AT1G20530.1	Thale cress	cytosol	25.04	26.87
GSMUA_Achr3P00490_001	Banana	nucleus	24.28	25.72
GSMUA_Achr9P08510_001	Banana	nucleus	29.89	25.19
GSMUA_Achr3P19020_001	Banana	cytosol	29.44	23.52
GSMUA_Achr7P04930_001	Banana	nucleus	21.09	23.44
GSMUA_Achr2P22150_001	Banana	cytosol	20.94	23.39
GSMUA_Achr7P16020_001	Banana	nucleus	22.0	23.2
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	18.36	22.08
GSMUA_Achr8P34030_001	Banana	cytosol	19.73	21.81
GSMUA_Achr1P26500_001	Banana	cytosol	17.3	21.63
GSMUA_Achr6P32100_001	Banana	cytosol	18.51	20.27
GSMUA_Achr3P24800_001	Banana	nucleus	18.51	20.23
GSMUA_Achr11P...	Banana	cytosol	20.03	19.82
GSMUA_Achr3P00690_001	Banana	nucleus	15.02	19.53
GSMUA_Achr9P05210_001	Banana	nucleus	18.82	19.2
GSMUA_Achr11P...	Banana	cytosol	18.97	18.94
GSMUA_Achr1P17130_001	Banana	nucleus	17.15	18.62
GSMUA_Achr9P30410_001	Banana	cytosol	17.3	18.54
GSMUA_Achr4P21640_001	Banana	nucleus	19.27	18.14
GSMUA_Achr11P...	Banana	nucleus	19.73	17.98
GSMUA_Achr8P10940_001	Banana	nucleus	19.88	17.8
GSMUA_Achr5P00570_001	Banana	cytosol	17.91	17.66
Bra025823.1-P	Field mustard	peroxisome	26.4	15.16
CDY29526	Canola	peroxisome	26.4	15.14

Protein Annotations

EnsemblPlants:GSMUA_Achr11P01310_001	EnsemblPlants:GSMUA_Achr11T01310_001	EnsemblPlantsGene:GSMUA_Achr11G01310_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF2	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI000296AFBA
UniProt:M0RNG1	MapMan:35.2	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01310_001]

Coordinates

chr11:+:884318..889995

Molecular Weight (calculated)

74949.6 Da

IEP (calculated)

6.638

GRAVY (calculated)

-0.519

Length

659 amino acids

Sequence
(BLAST)

001: MGCSESKVEK QEAVALCRAR TDLLEAAIHH RAALADAHAA YSDSLLSVSA ALHRLLVLLL PPSYSSSPSS PDSRVSFLPA DSCYNGDDGT PFYSCGSSPV
101: EHLDHRKTSY SSRATPPPPS PLRTSTWDLL NLFETDNNSY YRHTPSPNYQ KLRDEEGIPD LEEEDQQVRM EAYREYVEEG SKNDHSSPPA SEVADKNVVA
201: DEVQKRRDEQ RNVAAPKKFL RDSAVARAIK TQFERASQCA RELSELLEIR DHHYHPAHSL SEFFSNFTDD KGMGYRSLAS TLRTLYNWER KLYHEVRFVI
301: ELSLRLSYLV FQAEEKMRLQ LNKSHKELTN LVKSGGNPHK IDSTEKLINN FSTKIGISIQ VVESISGKIN KLRNEELWPQ ITELILRLIR MWNVMLECHH
401: MQCLAISEAK RSDLDISSGK LSGDHADEMM QLEMEILKWI SNFSAWVNAQ RNYVKALNGW LLLYLHHEPE ETADGVTPYS PRRIGAPLVF IVSNCWSQAM
501: DWNSEREVLD AMQASAAAIH HLWEQQNIEP NERTIAIKDR DTWLRALKQK SKNIHREIDS LKKKLAIVPG HSGLPVYQWP FKGHTARLSS VQLGLEMIFE
601: AMKDFSASSV KAYGELLQHC GEQRIARENA KASFDSRCLP ATCMEDTIGQ KVFTTFGFD

Best Arabidopsis Sequence Match ( AT2G17110.1 )
(BLAST)

001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.