Factsheet for GSMUA_Achr3P00690_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P26500_001	Banana	cytosol	68.84	66.22
PGSC0003DMT400009224	Potato	nucleus	46.15	59.24
Os09t0538700-01	Rice	nucleus	68.64	53.29
KXG36086	Sorghum	nucleus	68.84	53.2
Zm00001d022626_P001	Maize	nucleus	67.46	52.62
KRH28816	Soybean	cytosol	3.35	51.52
TraesCS5D01G336000.1	Wheat	nucleus	67.26	51.28
TraesCS5B01G330400.1	Wheat	nucleus	67.26	50.9
VIT_04s0023g03760.t01	Wine grape	mitochondrion	62.52	50.56
HORVU5Hr1G084030.15	Barley	nucleus	66.67	49.85
KRH76635	Soybean	cytosol	60.35	48.96
Solyc02g083610.2.1	Tomato	nucleus	55.62	44.27
CDX73734	Canola	nucleus	55.03	43.59
CDX77992	Canola	nucleus	53.85	43.4
Bra036821.1-P	Field mustard	nucleus	54.64	43.28
KRH28815	Soybean	cytosol	35.5	39.82
KRH08031	Soybean	cytosol	30.18	35.01
AT3G51290.2	Thale cress	cytosol	54.44	34.59
GSMUA_Achr9P30410_001	Banana	cytosol	35.5	29.27
GSMUA_Achr5P00570_001	Banana	cytosol	37.87	28.74
GSMUA_Achr4P21640_001	Banana	nucleus	37.48	27.14
GSMUA_Achr11P...	Banana	nucleus	38.07	26.69
GSMUA_Achr8P10940_001	Banana	nucleus	36.69	25.27
GSMUA_Achr11P...	Banana	cytosol	28.6	21.97
GSMUA_Achr3P24800_001	Banana	nucleus	24.46	20.56
GSMUA_Achr1P17130_001	Banana	nucleus	24.46	20.43
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	19.92	18.43
GSMUA_Achr2P22150_001	Banana	cytosol	20.51	17.63
GSMUA_Achr8P34030_001	Banana	cytosol	19.92	16.95
GSMUA_Achr6P32100_001	Banana	cytosol	19.33	16.28
GSMUA_Achr3P22040_001	Banana	cytosol	21.7	16.04
GSMUA_Achr11P...	Banana	cytosol	20.91	15.92
GSMUA_Achr1P18120_001	Banana	cytosol	21.3	15.88
GSMUA_Achr7P16020_001	Banana	nucleus	19.53	15.84
GSMUA_Achr3P14690_001	Banana	nucleus	21.89	15.77
GSMUA_Achr7P04020_001	Banana	cytosol	21.7	15.71
GSMUA_Achr9P05210_001	Banana	nucleus	19.92	15.63
GSMUA_Achr3P00490_001	Banana	nucleus	19.13	15.59
GSMUA_Achr7P04930_001	Banana	nucleus	18.15	15.51
GSMUA_Achr11P...	Banana	mitochondrion	19.92	15.03
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	19.53	15.02
GSMUA_Achr9P08510_001	Banana	nucleus	20.51	13.3
GSMUA_Achr3P19020_001	Banana	cytosol	20.32	12.48

Protein Annotations

EnsemblPlants:GSMUA_Achr3P00690_001	EnsemblPlants:GSMUA_Achr3T00690_001	EnsemblPlantsGene:GSMUA_Achr3G00690_001	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF23	PFAM:PF04782	SEG:seg	UniParc:UPI000296AAF4	UniProt:M0SAN7	MapMan:35.1

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00690_001]

Coordinates

chr3:-:532535..535581

Molecular Weight (calculated)

57196.0 Da

IEP (calculated)

6.707

GRAVY (calculated)

-0.473

Length

507 amino acids

Sequence
(BLAST)

001: MSPSSDNWTS SEWEEVTTTV SEVTAAPAVV PPPSVVSGYS KESTSELAMV VVPRGKKDLS EIVKELDEYF LKATEAGSRV SLTLEAPNSD FSSNQGLSGD
101: SYGKNLNPLN WSWRSDSKTN GGFTRFGSCR GEMVRGFGSG VGAGIGNVSH TSTVEKLYAW EKKLFLEVKN AEMIREEHEK RVALLRKQEV RGVDYVKMEK
201: NKMEIERLES KMMVASQAIE TTTSEIIKLR ESELFPQLLE LLTGLMSMWR SMYECHQVQT HIVQQLKYLN CALNSHPTSN IHRQAALQLE LEVENWYSAF
301: CSLVNSQREY VHALTGWLRL SLFQCHHDSL AQSRQNPEIY SLCEEWQLAL DRIPDKVASE GIKSFLSVIH AVVMQQAEEQ KQKKRSEVAF RELEKRAEEL
401: RSLESKFGPY STTEGHGGMA QRSPVLEKRA KVEALKAKAE EEKSKYEKSV GVTRAMTLNN LQTGFPNVFQ AMTGFAGVCM QVFESVYNHQ RSLDRVLDAK
501: RLLPGEH

Best Arabidopsis Sequence Match ( AT3G51290.3 )
(BLAST)

001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEVKRLLP

Arabidopsis Description

Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.