Factsheet for GSMUA_Achr11P16180_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P10940_001	Banana	nucleus	81.33	79.89
GSMUA_Achr4P21640_001	Banana	nucleus	66.81	69.0
Os10t0562700-01	Rice	nucleus	67.63	63.75
Zm00001d029946_P003	Maize	nucleus	66.81	62.0
TraesCS1D01G219800.1	Wheat	nucleus	65.84	61.74
TraesCS1B01G231600.1	Wheat	nucleus	65.56	61.64
EER94480	Sorghum	nucleus	66.67	61.4
TraesCS1A01G218200.1	Wheat	nucleus	65.28	61.38
Zm00001d000039_P001	Maize	nucleus	65.98	61.08
CDX83412	Canola	nucleus	53.8	57.8
KRH01066	Soybean	nucleus	57.4	56.93
CDX71821	Canola	nucleus	54.77	55.77
CDY41178	Canola	nucleus	55.33	55.48
Bra007523.1-P	Field mustard	nucleus	55.33	55.33
CDX95620	Canola	nucleus	53.11	55.25
CDY56992	Canola	nucleus	55.46	55.16
AT1G02110.1	Thale cress	nucleus	53.39	54.91
CDY42691	Canola	nucleus	54.77	54.77
KRH40173	Soybean	nucleus	57.95	54.56
Bra014497.1-P	Field mustard	nucleus	55.6	52.76
Bra000365.1-P	Field mustard	nucleus	56.85	51.25
VIT_15s0021g01550.t01	Wine grape	nucleus	59.61	51.01
AT3G60320.1	Thale cress	nucleus	55.74	50.63
KRH66512	Soybean	nucleus	54.63	49.44
PGSC0003DMT400066867	Potato	nucleus	57.54	48.83
Solyc01g090270.2.1	Tomato	nucleus	56.85	46.92
GSMUA_Achr1P26500_001	Banana	cytosol	29.32	40.23
GSMUA_Achr3P00690_001	Banana	nucleus	26.69	38.07
GSMUA_Achr9P30410_001	Banana	cytosol	26.56	31.22
GSMUA_Achr5P00570_001	Banana	cytosol	26.83	29.04
GSMUA_Achr11P...	Banana	cytosol	24.76	27.12
GSMUA_Achr3P24800_001	Banana	nucleus	21.16	25.37
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	18.95	25.0
GSMUA_Achr1P17130_001	Banana	nucleus	20.06	23.89
GSMUA_Achr8P34030_001	Banana	cytosol	19.36	23.49
GSMUA_Achr2P22150_001	Banana	cytosol	18.12	22.2
GSMUA_Achr3P22040_001	Banana	cytosol	21.02	22.16
GSMUA_Achr3P14690_001	Banana	nucleus	20.47	21.02
GSMUA_Achr7P16020_001	Banana	nucleus	18.12	20.96
GSMUA_Achr1P18120_001	Banana	cytosol	19.5	20.74
GSMUA_Achr6P32100_001	Banana	cytosol	17.15	20.6
GSMUA_Achr11P...	Banana	mitochondrion	19.09	20.54
GSMUA_Achr3P00490_001	Banana	nucleus	17.15	19.94
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	17.98	19.73
GSMUA_Achr7P04020_001	Banana	cytosol	19.09	19.71
GSMUA_Achr7P04930_001	Banana	nucleus	16.04	19.56
GSMUA_Achr11P...	Banana	cytosol	17.84	19.37
GSMUA_Achr9P05210_001	Banana	nucleus	16.6	18.58
GSMUA_Achr9P08510_001	Banana	nucleus	19.64	18.16
GSMUA_Achr3P19020_001	Banana	cytosol	18.67	16.36

Protein Annotations

EnsemblPlants:GSMUA_Achr11P16180_001	EnsemblPlants:GSMUA_Achr11T16180_001	EnsemblPlantsGene:GSMUA_Achr11G16180_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF9	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002968BAF
UniProt:M0RSP8	MapMan:35.1	:	:	:	:

Description

DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G16180_001]

Coordinates

chr11:-:17864105..17868591

Molecular Weight (calculated)

80382.3 Da

IEP (calculated)

6.606

GRAVY (calculated)

-0.599

Length

723 amino acids

Sequence
(BLAST)

001: MGCTASRLEN EDCVRRCKER RRLMKEAVCS RHHLASAHAD YLRSLRLTGS ALASFAVGEL LAVSEHTPPV LLRSSAASPS ASLPPPTLQP PPPPSPSPPP
101: SQLRPRHRHH FSPSPSPTVA GTPFHRPSAA AVADGHPRFP AVNSTYATTP SQSSSAWDWE NFYPPSPPDS EFFERRKAEL EEKNRLQHHL PPEEEVGESD
201: EEQISQEEEE QGGGGREEVH CREWGERYTS TTSSTSRSDG EPEQEDDQED DRATIASSAA AEETSLSSAV AELRMVVRHQ SLAEIAEAIK EHFIKAADAG
301: SAVSDLLEIG HAQFDGSFRQ LKKTVYHSSS VLSVLSSSWT SKPPLAIRYS LDPVALEESG GGKSNGSTLE RLLAWEKKLY EEVKVREGVK IEHEKKLSTL
401: QSQEYRQKDD AKLDKTKASI QKLHSLIIVT SQAVTTTSSA ITKVRDDELA PQLVEICYAL LNMWRQMNKF HEIQNHIVQQ VRGLVNRAST GESTSDLHRL
501: ATRDLEAAVS AWHSSFNRLI KYQRDYVHAL YGWLKLTLLQ VSSDNPQKDH SSPVAVELTA FCDEWKQALD RLPDTVASEA VKSFMNVIHV IYTKQVEELK
601: IKKRAETYSK ELEKKSTALR NTEKKYYQSY SMVGLALPGG GHDNDGQVFD TRDPLAEKKS EIAACRRKVE DEMMRHAKAV EVTRSMTLNN IQTGLPGVFQ
701: ALTGFSGMFV EALEGVCRRA GSV

Best Arabidopsis Sequence Match ( AT1G02110.1 )
(BLAST)

001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN

Arabidopsis Description

BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.