Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P32100_001 | Banana | cytosol | 58.51 | 62.79 |
| KXG39486 | Sorghum | nucleus | 52.94 | 41.2 |
| AT2G27090.2 | Thale cress | nucleus | 47.37 | 41.18 |
| CDY04477 | Canola | nucleus | 44.43 | 39.92 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 23.53 | 39.9 |
| Bra012035.1-P | Field mustard | nucleus | 44.27 | 39.67 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 33.13 | 39.41 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 49.23 | 39.11 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 49.07 | 38.9 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 48.92 | 38.87 |
| Os03t0321500-01 | Rice | plasma membrane | 50.62 | 38.79 |
| KRH73448 | Soybean | nucleus | 46.9 | 38.7 |
| KRH14687 | Soybean | nucleus | 46.75 | 38.57 |
| CDX71474 | Canola | nucleus | 42.88 | 38.53 |
| KRG89850 | Soybean | nucleus | 45.98 | 37.88 |
| Solyc09g007100.2.1 | Tomato | nucleus | 44.27 | 37.43 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 48.14 | 37.42 |
| KRH18693 | Soybean | nucleus | 46.59 | 37.39 |
| Zm00001d028960_P001 | Maize | nucleus | 50.31 | 36.81 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 26.78 | 36.73 |
| GSMUA_Achr2P22150_001 | Banana | cytosol | 33.44 | 36.61 |
| PGSC0003DMT400005111 | Potato | nucleus | 43.5 | 36.54 |
| Os07t0686500-01 | Rice | endoplasmic reticulum | 39.32 | 35.57 |
| GSMUA_Achr11P... | Banana | cytosol | 30.96 | 30.03 |
| GSMUA_Achr1P07380_001 | Banana | cytosol, nucleus, peroxisome | 23.22 | 27.37 |
| GSMUA_Achr8P34030_001 | Banana | cytosol | 24.3 | 26.34 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 21.83 | 22.67 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 21.36 | 22.08 |
| GSMUA_Achr1P26500_001 | Banana | cytosol | 17.65 | 21.63 |
| GSMUA_Achr1P17130_001 | Banana | nucleus | 19.97 | 21.25 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 19.5 | 21.25 |
| GSMUA_Achr11P... | Banana | mitochondrion | 21.05 | 20.24 |
| GSMUA_Achr3P00690_001 | Banana | nucleus | 15.63 | 19.92 |
| GSMUA_Achr3P24800_001 | Banana | nucleus | 18.58 | 19.9 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 21.67 | 19.89 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 20.59 | 19.56 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 20.9 | 19.29 |
| GSMUA_Achr11P... | Banana | cytosol | 19.66 | 19.24 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 23.22 | 19.18 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 20.12 | 18.95 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 19.2 | 18.82 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 18.11 | 17.52 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 16.25 | 17.07 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 21.52 | 16.85 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 19.04 | 16.71 |
| GSMUA_Achr11P... | Banana | nucleus | 18.58 | 16.6 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 17.65 | 16.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P05210_001 | EnsemblPlants:GSMUA_Achr9T05210_001 | EnsemblPlantsGene:GSMUA_Achr9G05210_001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil |
| PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI0002964FC4 |
| UniProt:M0TXN0 | MapMan:35.1 | : | : | : | : |
Description
DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G05210_001]
Coordinates
chr9:+:3365217..3372081
Molecular Weight (calculated)
73226.8 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.615
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAANSKNEE DKALVLCKER KRFVRRALDE RCSLAAAHVS YVQSLRNTGI ALRKFPVSHF SNSSPSLSQH VETAESFSPV PSPLSSGGLH VNHMKARKTS
101: YMTVKEKLPI SATATQRTSS TTPKHLVGLN HGFDNADEIS CLGEEEGIPE LEDEGDRRAS TNEKTKHQNG DNMKLINGTS ETCETPEMTP TTVEPDEVAV
201: PINAKAKESD PQIKHDSRDF LSCMKEIEEL FMKASESGRE VPRMLEANKV QFRPLFPEEK AHRSKASAFF TNCLACCKEG TSYPHVYVTN EMKYLTWHRS
301: MSSLSSSSRN FLGPTVKDDT EDLSSSLFGN MYMNSGSHAS TLDRLYAWER KLYDEVKASG IIRREYDMKC RLLQHKESIG ESRISVDKTR AVVKDLHSRI
401: RVAIQRIDSI SKKIEEIRDK ELQPQLEELI GGLTRMWRTM LNYHNHQYSI ILSASNNGST KVSVRSQWQH QATFLELELN SLGSNFTEWM SAHKSYLEAI
501: NGWLLKCIVL SLKWNKSSRR KPPQPFSPKR AIAPPIYVTC RDWLNILDQL PTKEVVSSIK DLKKLGEHIQ KNDSSVDCSL NYDHLQSALT IFLDRLRNFA
601: ESSVSKYEAL QKSIEEARAA YERNCSHSCL QYLIVQETQM SNSENP
101: YMTVKEKLPI SATATQRTSS TTPKHLVGLN HGFDNADEIS CLGEEEGIPE LEDEGDRRAS TNEKTKHQNG DNMKLINGTS ETCETPEMTP TTVEPDEVAV
201: PINAKAKESD PQIKHDSRDF LSCMKEIEEL FMKASESGRE VPRMLEANKV QFRPLFPEEK AHRSKASAFF TNCLACCKEG TSYPHVYVTN EMKYLTWHRS
301: MSSLSSSSRN FLGPTVKDDT EDLSSSLFGN MYMNSGSHAS TLDRLYAWER KLYDEVKASG IIRREYDMKC RLLQHKESIG ESRISVDKTR AVVKDLHSRI
401: RVAIQRIDSI SKKIEEIRDK ELQPQLEELI GGLTRMWRTM LNYHNHQYSI ILSASNNGST KVSVRSQWQH QATFLELELN SLGSNFTEWM SAHKSYLEAI
501: NGWLLKCIVL SLKWNKSSRR KPPQPFSPKR AIAPPIYVTC RDWLNILDQL PTKEVVSSIK DLKKLGEHIQ KNDSSVDCSL NYDHLQSALT IFLDRLRNFA
601: ESSVSKYEAL QKSIEEARAA YERNCSHSCL QYLIVQETQM SNSENP
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.