Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G176800.1 | Wheat | cytosol | 97.67 | 97.91 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 97.55 | 97.79 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 93.62 | 91.82 |
| KXG39486 | Sorghum | nucleus | 72.64 | 71.33 |
| Os03t0321500-01 | Rice | plasma membrane | 73.62 | 71.17 |
| Zm00001d028960_P001 | Maize | nucleus | 70.55 | 65.12 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 34.97 | 52.49 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 37.18 | 50.33 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 38.9 | 49.07 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 26.87 | 46.5 |
| AT2G27090.2 | Thale cress | nucleus | 39.75 | 43.61 |
| KRG89850 | Soybean | nucleus | 41.84 | 43.49 |
| KRH18693 | Soybean | nucleus | 42.45 | 42.98 |
| CDY04477 | Canola | nucleus | 37.79 | 42.84 |
| Bra012035.1-P | Field mustard | nucleus | 37.79 | 42.72 |
| KRH73448 | Soybean | nucleus | 40.98 | 42.66 |
| KRH14687 | Soybean | nucleus | 40.37 | 42.02 |
| CDX71474 | Canola | nucleus | 36.81 | 41.72 |
| Solyc09g007100.2.1 | Tomato | nucleus | 38.4 | 40.97 |
| PGSC0003DMT400005111 | Potato | nucleus | 38.4 | 40.7 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 18.9 | 40.42 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 28.96 | 32.07 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 23.56 | 27.0 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 21.1 | 23.03 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 16.2 | 20.92 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 19.02 | 20.16 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 13.5 | 19.43 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 15.58 | 18.22 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 18.77 | 17.87 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 15.95 | 17.57 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 15.71 | 17.56 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 17.06 | 17.53 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 16.07 | 17.17 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 15.95 | 17.08 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 20.0 | 17.0 |
| TraesCS3A01G198900.1 | Wheat | nucleus | 16.56 | 16.65 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 17.42 | 15.92 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 17.55 | 15.25 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G128000.1 | EnsemblPlantsGene:TraesCS4A01G128000 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF6 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:-:164712375..164718504
Molecular Weight (calculated)
91834.3 Da
IEP (calculated)
6.428
GRAVY (calculated)
-0.621
Length
815 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTRATSED DKALVLCQER KRYVKEALDG RCAFAAAHFA YIQSLRHTGF ALRKFVEPEV PTDSSLYTST SATPEPPGMR HRSMNLSPSV SHPASDSFSP
101: APSPLSSGRF HVNHMKAGRN PVRTVEEKVP VPVTATLETS SSVPIQTVHD LDDSSTFEAP PGTPPWDYFG LFQPVESQLS FRDEKESGHD FENADDIRRL
201: REKEGIPELE EELEKSHAHA GDVRLSQQEK TLDVRDGEQS TMSGREDDFA DSEDDFENPS SEPLVRMFKN RNDTPVENIV TDQSPAHLAA DKVVSENLVD
301: KVALENIADK VALENIHSKT EEPKSDNKVL EPKSDNRVLD ISMYETDETP VTSPVKEVVS SVAAHSINGK SKEPFRDVRN GVKDLSTSMK EVEILFIKAS
401: DSGKEVPRML EADKVNFRPL LTEERARGLK APGFFATLFA CCREEVPVPQ PPPQADVKHL TWHRSVSSHS SSSRNPLGAA SKVDVDGLTG NIFSGVYMNS
501: GSHASTLDRL YAWERKLCDE VKASSTICRQ YDEKCRYLRN QESRGESHMS IDRTRAVVKD LYSRICVAIQ RIDMISKNIE DLRDKELQPQ LEELIGSLTR
601: MWETMLECHR HQHEIIKLVS NSGGIKVLIR SESQFQATLL LQVELKSLFS NFQRWIVSHR SYLNSLQSWL LKCVKSLRTK KKSRKKKDTD FQITNFAVAP
701: IFTICEQWIK LLDELPIEDL EGGIKGLLAD INHCMPRQEK RRGGSRSTFA IPNGGLNDEM RGIHRNDAHT DLQSSLESFL GKLEFFSDVS VHKYGELKKK
801: INTAKEKYEE ANRLH
101: APSPLSSGRF HVNHMKAGRN PVRTVEEKVP VPVTATLETS SSVPIQTVHD LDDSSTFEAP PGTPPWDYFG LFQPVESQLS FRDEKESGHD FENADDIRRL
201: REKEGIPELE EELEKSHAHA GDVRLSQQEK TLDVRDGEQS TMSGREDDFA DSEDDFENPS SEPLVRMFKN RNDTPVENIV TDQSPAHLAA DKVVSENLVD
301: KVALENIADK VALENIHSKT EEPKSDNKVL EPKSDNRVLD ISMYETDETP VTSPVKEVVS SVAAHSINGK SKEPFRDVRN GVKDLSTSMK EVEILFIKAS
401: DSGKEVPRML EADKVNFRPL LTEERARGLK APGFFATLFA CCREEVPVPQ PPPQADVKHL TWHRSVSSHS SSSRNPLGAA SKVDVDGLTG NIFSGVYMNS
501: GSHASTLDRL YAWERKLCDE VKASSTICRQ YDEKCRYLRN QESRGESHMS IDRTRAVVKD LYSRICVAIQ RIDMISKNIE DLRDKELQPQ LEELIGSLTR
601: MWETMLECHR HQHEIIKLVS NSGGIKVLIR SESQFQATLL LQVELKSLFS NFQRWIVSHR SYLNSLQSWL LKCVKSLRTK KKSRKKKDTD FQITNFAVAP
701: IFTICEQWIK LLDELPIEDL EGGIKGLLAD INHCMPRQEK RRGGSRSTFA IPNGGLNDEM RGIHRNDAHT DLQSSLESFL GKLEFFSDVS VHKYGELKKK
801: INTAKEKYEE ANRLH
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.