CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73448	Soybean	nucleus	94.0	94.0
KRG89850	Soybean	nucleus	70.63	70.54
KRH18693	Soybean	nucleus	71.9	69.94
VIT_06s0009g01600.t01	Wine grape	nucleus	37.8	62.84
Solyc09g007100.2.1	Tomato	nucleus	56.32	57.72
AT2G27090.2	Thale cress	nucleus	54.41	57.34
PGSC0003DMT400005111	Potato	nucleus	56.19	57.22
CDY04477	Canola	nucleus	51.09	55.63
Bra012035.1-P	Field mustard	nucleus	51.09	55.48
CDX71474	Canola	nucleus	49.94	54.38
VIT_06s0009g01610.t01	Wine grape	nucleus	25.54	52.49
GSMUA_Achr9P05210_001	Banana	nucleus	38.57	46.75
GSMUA_Achr6P32100_001	Banana	cytosol	35.89	46.68
KXG39486	Sorghum	nucleus	43.55	41.08
TraesCS4A01G128000.1	Wheat	cytosol	42.02	40.37
TraesCS4B01G176800.1	Wheat	cytosol	41.89	40.34
Os03t0321500-01	Rice	plasma membrane	43.42	40.33
TraesCS4D01G178500.1	Wheat	cytosol	41.63	40.1
HORVU4Hr1G052040.1	Barley	cytosol	41.76	39.35
TraesCS2A01G099100.1	Wheat	nucleus	25.8	37.2
Zm00001d028960_P001	Maize	nucleus	41.76	37.03
Os07t0686500-01	Rice	endoplasmic reticulum	33.46	36.69
KRG97595	Soybean	cytosol	29.63	35.1
KRH43215	Soybean	nucleus	30.91	32.66
KRH59380	Soybean	nucleus	30.52	32.52
KRH19063	Soybean	nucleus	25.03	26.17
KRH28815	Soybean	cytosol	15.07	26.11
KRH02818	Soybean	nucleus	24.27	25.5
KRH37304	Soybean	nucleus	24.52	25.1
KRH12287	Soybean	nucleus	24.27	24.58
KRH36090	Soybean	nucleus	23.37	23.86
KRG90664	Soybean	cytosol	23.24	23.61
KRH76635	Soybean	cytosol	17.88	22.4
KRH74089	Soybean	cytosol	21.84	21.84
KRH14028	Soybean	cytosol	20.18	21.56
KRH60958	Soybean	cytosol	18.01	21.3
KRH53256	Soybean	cytosol	22.48	20.9
KRH51633	Soybean	cytosol	17.62	20.78
KRH64648	Soybean	cytosol	21.84	20.43
KRH12768	Soybean	cytosol	16.35	20.38
KRH62002	Soybean	cytosol	17.5	19.6
KRH09858	Soybean	nucleus	18.26	19.22
KRH52653	Soybean	cytosol	17.37	19.13
KRH01066	Soybean	nucleus	17.75	19.07
KRH23466	Soybean	nucleus	18.14	18.96
KRH37731	Soybean	nucleus	15.33	18.63
KRH08031	Soybean	cytosol	9.96	17.85
KRH40173	Soybean	nucleus	17.5	17.84
KRH66512	Soybean	nucleus	18.14	17.77
KRH28816	Soybean	cytosol	0.26	6.06

Protein Annotations

EMBL:ACUP02008516	EnsemblPlants:KRH14687	EnsemblPlantsGene:GLYMA_14G041800	EntrezGene:778156	InterPro:DUF630	InterPro:DUF632
PANTHER:PTHR21450	PANTHER:PTHR21450:SF6	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH14687	ProteinID:KRH14687.1
ProteinID:KRH14688.1	SEG:seg	UniParc:UPI0006ED8673	UniProt:A0A0R0GKJ5	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr14:-:3154587..3159978

Molecular Weight (calculated)

88014.0 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.714

Length

783 amino acids

Sequence
(BLAST)

001: MGASSSKMED DKALQLCRER KKFVRQALDG RCSLAAAHVS YIQSLKNTGT ALRKFTEPEG PIEPSLYTTA TPEQPLALTE RTLSFSSASV SHHIDAAEHE
101: NFSPTPSLPS SSSKFRANHM KHSTISSKKV EEKPPVPVIG IVTSSGTTTQ NTSVMSGTAA FEDSSLPAGT PQWDFFGLFH PIDHQFSFQD GKGMHQDIGN
201: ADDIQRLREE EGIPELEDDE EKASSHGREH SRDSEDEFDE EPAAETLVQR FENLNRSNSH VQANFEPATT KPLRGHSASE VELVNGEKGN SAYLSPLKTA
301: PMPALPPPET NKPMEKESRN ENKVTPKNFF SSVRDIELLF IKASESGQEV PKMLEANKVL FRPIFQGKEN GSLVSSFLKV CFSCGEDPSQ VPEEPAQNSV
401: KYLTWHRTAS SRSSSSRNPL GANSIDNAED HANNLFDNSC MISGSHASTL DRLYAWERKL YDEVKASEIV RKEYDMKCKF LRQLESKGEK TSTVDKTRAK
501: VKDLHSRIIV SIHRINSISK RIAELRDKEL QPQLEELIEG LNRMWEVMHE CHKLQFQIMS AAYNNSHARI TMHSELRRQI TSYLENELQF LSSSFTKWIG
601: AQKCYLEAIN GWLHKCVRHE EKSSKRKRRL QSDLSFYDPP IYVTCALWLD KLSALPVKDV ADSIKSLATD TAQFLPHQDK NQGKGAHPHM STWKADIGGE
701: SADGLLRDDI SEDWVAGLDQ FRRSLIRFLS QLNNLSGCSV KMYTELRQAI QKVKNYQRLN SQSQNGHLNS QSQDGHPNSE SQS

Best Arabidopsis Sequence Match ( AT2G27090.2 )
(BLAST)

001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK

Arabidopsis Description

At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.