Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005111 | Potato | nucleus | 96.47 | 95.84 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 38.87 | 63.06 |
| KRH14687 | Soybean | nucleus | 57.72 | 56.32 |
| KRH73448 | Soybean | nucleus | 57.33 | 55.94 |
| AT2G27090.2 | Thale cress | nucleus | 53.4 | 54.91 |
| KRH18693 | Soybean | nucleus | 57.59 | 54.66 |
| CDY04477 | Canola | nucleus | 51.31 | 54.52 |
| KRG89850 | Soybean | nucleus | 55.76 | 54.34 |
| Bra012035.1-P | Field mustard | nucleus | 51.05 | 54.09 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 26.96 | 54.07 |
| CDX71474 | Canola | nucleus | 50.13 | 53.27 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 35.08 | 44.52 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 37.43 | 44.27 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 27.62 | 38.86 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 40.97 | 38.4 |
| KXG39486 | Sorghum | nucleus | 41.62 | 38.31 |
| Os03t0321500-01 | Rice | plasma membrane | 42.15 | 38.2 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 40.58 | 38.13 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 40.45 | 38.01 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 40.31 | 37.06 |
| Os07t0686500-01 | Rice | endoplasmic reticulum | 34.16 | 36.55 |
| Zm00001d028960_P001 | Maize | nucleus | 41.1 | 35.56 |
| Solyc04g054880.2.1 | Tomato | nucleus | 32.2 | 34.31 |
| Solyc07g047830.2.1 | Tomato | nucleus | 23.43 | 23.46 |
| Solyc01g111740.2.1 | Tomato | cytosol | 22.12 | 23.18 |
| Solyc10g074470.1.1 | Tomato | cytosol | 22.64 | 21.54 |
| Solyc02g083610.2.1 | Tomato | nucleus | 17.15 | 20.57 |
| Solyc08g068100.2.1 | Tomato | cytosol | 18.72 | 19.72 |
| Solyc01g112050.2.1 | Tomato | nucleus | 22.38 | 19.21 |
| Solyc03g120140.2.1 | Tomato | cytosol | 6.81 | 18.12 |
| Solyc06g060270.2.1 | Tomato | nucleus | 21.07 | 15.88 |
| Solyc01g090270.2.1 | Tomato | nucleus | 18.06 | 15.75 |
Protein Annotations
| EnsemblPlants:Solyc09g007100.2.1 | EnsemblPlantsGene:Solyc09g007100.2 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0009506 |
| GO:GO:0016020 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 | PFAM:PF04782 |
| PFAM:PF04783 | SEG:seg | UniParc:UPI000276B521 | UniProt:K4CQA0 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr9:+:743380..748421
Molecular Weight (calculated)
86099.8 Da
IEP (calculated)
7.055
GRAVY (calculated)
-0.732
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASNSKLEE DKALQLCRER KKFVRQALDG RCNLAATHIA YIESLKITGT VLRRFAEPEA PIGSSIYTST SATPELRGLT EKSLSHFSFS SRSISRHVDA
101: TENILPSPSS PTSSRYHANH MKFRGTFSRK VEEKPSVPVT VSVTSATPQN STPRSAERPE ASPFEIPHET SPFEIPPSPS ETSPWDYFGL GHDIDNHLTS
201: QNGRIENGND NRHHGDEDII STSEDEEEHY SSPGRDGSQV SDDEFDEPSA ETLVRSFQNV NRTTDHASNS GSPEITSVRS EVSEAKSLNV EKSKSPDLSP
301: LRAAPSGPAD DNDMKTPVKE NDVENKVAPK DFYFSIKDIE YLFIKASESG REVPRMLEAN KFHFRPIFPG KESGSMTRVL MKSCFSCGDD PSQIPEEPPQ
401: NSVKYLTWHR TTSSHASSPN RHGVNSTDGI EDVSNNLFDN FCMVSGSHAS TLDRLFAWEK KLYDEVKASE MIRSDYDAKR KLLRQLESKV ETPQRIDKTR
501: AVVKDLHSRI GVAIHRINSI SRKIEEIRDK ELQPQLEELI EGLRKMWEVM FDCHKLQLHI ISIAHSPGNM KILIQSDSRR QIAIHLEHEL SSLSSSFTKW
601: IVSQKAYVEA INKWLHKSVF LREKSSRRKR KQQPVPLRNH GPPIYTTCSV WLEMFDSLPT KEVSDAIKGL AAEISHLLPR QEKHQGKGGN HRHGIDGEPG
701: LKTPLRDDSP EDWIAGFDHF RTSLTFFLSQ LNNFSESSVK MFTQLQKAIQ EAKHGHALRM NSQS
101: TENILPSPSS PTSSRYHANH MKFRGTFSRK VEEKPSVPVT VSVTSATPQN STPRSAERPE ASPFEIPHET SPFEIPPSPS ETSPWDYFGL GHDIDNHLTS
201: QNGRIENGND NRHHGDEDII STSEDEEEHY SSPGRDGSQV SDDEFDEPSA ETLVRSFQNV NRTTDHASNS GSPEITSVRS EVSEAKSLNV EKSKSPDLSP
301: LRAAPSGPAD DNDMKTPVKE NDVENKVAPK DFYFSIKDIE YLFIKASESG REVPRMLEAN KFHFRPIFPG KESGSMTRVL MKSCFSCGDD PSQIPEEPPQ
401: NSVKYLTWHR TTSSHASSPN RHGVNSTDGI EDVSNNLFDN FCMVSGSHAS TLDRLFAWEK KLYDEVKASE MIRSDYDAKR KLLRQLESKV ETPQRIDKTR
501: AVVKDLHSRI GVAIHRINSI SRKIEEIRDK ELQPQLEELI EGLRKMWEVM FDCHKLQLHI ISIAHSPGNM KILIQSDSRR QIAIHLEHEL SSLSSSFTKW
601: IVSQKAYVEA INKWLHKSVF LREKSSRRKR KQQPVPLRNH GPPIYTTCSV WLEMFDSLPT KEVSDAIKGL AAEISHLLPR QEKHQGKGGN HRHGIDGEPG
701: LKTPLRDDSP EDWIAGFDHF RTSLTFFLSQ LNNFSESSVK MFTQLQKAIQ EAKHGHALRM NSQS
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.