Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046483 | Potato | cytosol | 96.3 | 95.38 |
| VIT_03s0038g02660.t01 | Wine grape | nucleus | 60.08 | 67.28 |
| KRH36090 | Soybean | nucleus | 58.44 | 55.54 |
| KRG90664 | Soybean | cytosol | 58.02 | 54.86 |
| GSMUA_Achr1P07380_001 | Banana | cytosol, nucleus, peroxisome | 37.45 | 49.82 |
| Os09t0542500-00 | Rice | cytosol | 36.76 | 48.91 |
| GSMUA_Achr8P34030_001 | Banana | cytosol | 39.92 | 48.83 |
| EER97113 | Sorghum | cytosol | 44.31 | 44.61 |
| Zm00001d022598_P001 | Maize | cytosol | 43.76 | 44.12 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 44.31 | 43.71 |
| TraesCS5D01G340500.1 | Wheat | plastid | 44.31 | 43.71 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 44.31 | 43.24 |
| HORVU5Hr1G084580.2 | Barley | cytosol | 43.07 | 43.07 |
| Solyc07g047830.2.1 | Tomato | nucleus | 26.61 | 25.43 |
| Solyc03g120140.2.1 | Tomato | cytosol | 9.88 | 25.09 |
| Solyc04g054880.2.1 | Tomato | nucleus | 24.14 | 24.55 |
| Solyc10g074470.1.1 | Tomato | cytosol | 26.06 | 23.66 |
| Solyc02g083610.2.1 | Tomato | nucleus | 20.3 | 23.23 |
| Solyc09g007100.2.1 | Tomato | nucleus | 23.18 | 22.12 |
| Solyc08g068100.2.1 | Tomato | cytosol | 21.67 | 21.79 |
| Solyc01g112050.2.1 | Tomato | nucleus | 26.06 | 21.35 |
| Solyc01g090270.2.1 | Tomato | nucleus | 24.28 | 20.21 |
| Solyc06g060270.2.1 | Tomato | nucleus | 27.3 | 19.63 |
Protein Annotations
| EnsemblPlants:Solyc01g111740.2.1 | EnsemblPlantsGene:Solyc01g111740.2 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF17 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI00027678E5 | UniProt:K4B436 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:97927698..97931735
Molecular Weight (calculated)
83623.7 Da
IEP (calculated)
5.263
GRAVY (calculated)
-0.726
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVASKLEE EEEVVSICKE RKQYLKLAVD RRYTLADAHY KYCQALYGVS AALKLFVARH STPTSPYLIT FPPPCCPSSP KKECVVSNPL FLQQTPSEPT
101: QETICCGPCN KSTATPSDSS EEEREEKVMK QQQQPQGYGY YYMEMPQMMH SPPTDFGWDF FNPFNSVRPE MISGYHRISE EDLRAVREQE GIPDLEEEEE
201: EDEDEMKEEN KVVATKEKEN VEQRENGNEV VQQPVHTANV NQEDQRISLT VVDNPLQGRE LLEALTDIED HFVKAYDAGK EVSRMLEANW VHSQPNLGEP
301: KENSTKIIPA ITWKSPASRS PSCKSLVASS SKSSSTWTEF KNDLFDDYGG MGSGSHLLTL GRLYAWEKKL YDEVKAGDST WKLYEKKCNQ LKNHDARGDE
401: GRTADKTRAA VKELYSRILV TIRSAETISK RIDELRDDEL QPQIIELLQG MMRTWKIMLE SHEIQNKIIF DVKSFTCPAY GKFCNDSHRL ATVQLDVELQ
501: NWCARFRDYI AAQKAYVEAL HGWLSKFTVS EVELYSKSRS STPACRVNGP PLLMICHDWL SAMNKLPDRA VSVALKGCGK DVRALWVQQG EEQQQKRKVD
601: SMSKELDRKT LAFQKVENKL YEFKLTDRSS ELEIDHRAEY LKERKDLLDN FRKRVDLEKE EHQKCMQETQ RITLNGFQTG FCRVFESITE FSSEALKMYN
701: ELLSSGEKAE KIVNQPSIES SQAGEDVKR
101: QETICCGPCN KSTATPSDSS EEEREEKVMK QQQQPQGYGY YYMEMPQMMH SPPTDFGWDF FNPFNSVRPE MISGYHRISE EDLRAVREQE GIPDLEEEEE
201: EDEDEMKEEN KVVATKEKEN VEQRENGNEV VQQPVHTANV NQEDQRISLT VVDNPLQGRE LLEALTDIED HFVKAYDAGK EVSRMLEANW VHSQPNLGEP
301: KENSTKIIPA ITWKSPASRS PSCKSLVASS SKSSSTWTEF KNDLFDDYGG MGSGSHLLTL GRLYAWEKKL YDEVKAGDST WKLYEKKCNQ LKNHDARGDE
401: GRTADKTRAA VKELYSRILV TIRSAETISK RIDELRDDEL QPQIIELLQG MMRTWKIMLE SHEIQNKIIF DVKSFTCPAY GKFCNDSHRL ATVQLDVELQ
501: NWCARFRDYI AAQKAYVEAL HGWLSKFTVS EVELYSKSRS STPACRVNGP PLLMICHDWL SAMNKLPDRA VSVALKGCGK DVRALWVQQG EEQQQKRKVD
601: SMSKELDRKT LAFQKVENKL YEFKLTDRSS ELEIDHRAEY LKERKDLLDN FRKRVDLEKE EHQKCMQETQ RITLNGFQTG FCRVFESITE FSSEALKMYN
701: ELLSSGEKAE KIVNQPSIES SQAGEDVKR
001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.