Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009224 | Potato | nucleus | 60.91 | 98.23 |
| KRH76635 | Soybean | cytosol | 66.88 | 68.16 |
| VIT_04s0023g03760.t01 | Wine grape | mitochondrion | 66.25 | 67.3 |
| KRH28815 | Soybean | cytosol | 46.62 | 65.71 |
| CDX73734 | Canola | nucleus | 61.85 | 61.56 |
| CDX77992 | Canola | nucleus | 60.75 | 61.53 |
| Bra036821.1-P | Field mustard | nucleus | 61.7 | 61.41 |
| GSMUA_Achr1P26500_001 | Banana | cytosol | 48.51 | 58.63 |
| Os09t0538700-01 | Rice | nucleus | 57.46 | 56.05 |
| GSMUA_Achr3P00690_001 | Banana | nucleus | 44.27 | 55.62 |
| KXG36086 | Sorghum | nucleus | 56.67 | 55.03 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 57.14 | 54.74 |
| KRH28816 | Soybean | cytosol | 2.83 | 54.55 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 56.51 | 53.73 |
| HORVU5Hr1G084030.15 | Barley | nucleus | 56.99 | 53.54 |
| Zm00001d022626_P001 | Maize | nucleus | 54.63 | 53.54 |
| AT3G51290.2 | Thale cress | cytosol | 62.32 | 49.75 |
| KRH08031 | Soybean | cytosol | 32.81 | 47.83 |
| Solyc03g120140.2.1 | Tomato | cytosol | 13.5 | 29.97 |
| Solyc01g090270.2.1 | Tomato | nucleus | 38.15 | 27.74 |
| Solyc08g068100.2.1 | Tomato | cytosol | 26.53 | 23.31 |
| Solyc04g054880.2.1 | Tomato | nucleus | 23.7 | 21.06 |
| Solyc01g111740.2.1 | Tomato | cytosol | 23.23 | 20.3 |
| Solyc07g047830.2.1 | Tomato | nucleus | 23.55 | 19.66 |
| Solyc10g074470.1.1 | Tomato | cytosol | 22.45 | 17.81 |
| Solyc09g007100.2.1 | Tomato | nucleus | 20.57 | 17.15 |
| Solyc01g112050.2.1 | Tomato | nucleus | 23.23 | 16.63 |
| Solyc06g060270.2.1 | Tomato | nucleus | 26.22 | 16.47 |
Protein Annotations
| EnsemblPlants:Solyc02g083610.2.1 | EnsemblPlantsGene:Solyc02g083610.2 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF23 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | SUPFAM:SSF101447 | UniParc:UPI00027686B1 |
| UniProt:K4BAM9 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:46956086..46958927
Molecular Weight (calculated)
71473.9 Da
IEP (calculated)
8.371
GRAVY (calculated)
-0.554
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCWYSRLER EELVSRCKAR KRYMKQLVKS RQAFSASHSM YLRSLRNTGS ALLQFATGET DLHPQNHHLP PLPPSPPRRL TTPHPPPPPP PPPPPMSPTS
101: WTTSTTTSSA LPPPPPPPPP PPPPATSNWD FWDPFVPPPS SSRSVTEEEW DETTITSEAA VTTTVGAASV AAPPSAVSQF SKETTSTSEL AVVVSTKGKD
201: LVEIIKELDE YFLNAADAGA QLSLLLEVPN CAFSEQRSSD KLMSPFSWSF GGSSRWNGIG RFCDDPMNKS INGVNGAKAA SHCSTVERLY AWEKKLYLEV
301: KHAEALKLEH EKRGGHARKL EMKRADYVKT EKAKKEVEKL ESQMMVAAQA IETTSAEIIK LRESELYPQL VDLVKGLMYM WRSMYECHHV QTHIVQQLKY
401: LNTVPSTYPT SELHRQSTLQ LELELEQWHL SFCNLVKFHR DYIQSLTGWL RLSLFQLGNN PVHKTSQDNA VYSLCEEWHL AVNNAPDKVA SEGINSLLTV
501: IHAIVVQQSE EIKQKKKSEM AFKELDKKSS ELRSLESKYG PYSIPDSSSS STRNKNPVTD KRAKVDAIRA KAEDEKAKYD KAVSVTRAMT LNNLQMGLPH
601: VFQAVTGFAN VWTHAFESVY NQAKNTDQVH EMKRILP
101: WTTSTTTSSA LPPPPPPPPP PPPPATSNWD FWDPFVPPPS SSRSVTEEEW DETTITSEAA VTTTVGAASV AAPPSAVSQF SKETTSTSEL AVVVSTKGKD
201: LVEIIKELDE YFLNAADAGA QLSLLLEVPN CAFSEQRSSD KLMSPFSWSF GGSSRWNGIG RFCDDPMNKS INGVNGAKAA SHCSTVERLY AWEKKLYLEV
301: KHAEALKLEH EKRGGHARKL EMKRADYVKT EKAKKEVEKL ESQMMVAAQA IETTSAEIIK LRESELYPQL VDLVKGLMYM WRSMYECHHV QTHIVQQLKY
401: LNTVPSTYPT SELHRQSTLQ LELELEQWHL SFCNLVKFHR DYIQSLTGWL RLSLFQLGNN PVHKTSQDNA VYSLCEEWHL AVNNAPDKVA SEGINSLLTV
501: IHAIVVQQSE EIKQKKKSEM AFKELDKKSS ELRSLESKYG PYSIPDSSSS STRNKNPVTD KRAKVDAIRA KAEDEKAKYD KAVSVTRAMT LNNLQMGLPH
601: VFQAVTGFAN VWTHAFESVY NQAKNTDQVH EMKRILP
001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEVKRLLP
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEVKRLLP
Arabidopsis Description
Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.