CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28816	Soybean	cytosol	5.28	100.0
KRH28815	Soybean	cytosol	66.72	92.26
VIT_04s0023g03760.t01	Wine grape	mitochondrion	71.52	71.29
PGSC0003DMT400009224	Potato	nucleus	44.16	69.87
Solyc02g083610.2.1	Tomato	nucleus	68.16	66.88
CDX73734	Canola	nucleus	66.88	65.31
CDX77992	Canola	nucleus	65.6	65.18
Bra036821.1-P	Field mustard	nucleus	66.72	65.16
GSMUA_Achr1P26500_001	Banana	cytosol	52.0	61.67
GSMUA_Achr3P00690_001	Banana	nucleus	48.96	60.35
KRH08031	Soybean	cytosol	39.84	56.98
Os09t0538700-01	Rice	nucleus	59.2	56.66
KXG36086	Sorghum	nucleus	58.88	56.1
Zm00001d022626_P001	Maize	nucleus	56.8	54.62
TraesCS5D01G336000.1	Wheat	nucleus	58.08	54.59
TraesCS5B01G330400.1	Wheat	nucleus	58.24	54.33
HORVU5Hr1G084030.15	Barley	nucleus	58.4	53.83
AT3G51290.2	Thale cress	cytosol	66.24	51.88
KRH01066	Soybean	nucleus	38.88	33.33
KRH40173	Soybean	nucleus	38.56	31.38
KRH66512	Soybean	nucleus	38.08	29.79
KRH12768	Soybean	cytosol	28.96	28.82
KRH37731	Soybean	nucleus	28.32	27.48
KRH62002	Soybean	cytosol	29.28	26.18
KRH52653	Soybean	cytosol	29.44	25.88
KRH09858	Soybean	nucleus	29.6	24.87
KRH23466	Soybean	nucleus	29.76	24.83
KRG90664	Soybean	cytosol	26.56	21.53
KRH19063	Soybean	nucleus	25.44	21.23
KRH36090	Soybean	nucleus	25.92	21.12
KRG97595	Soybean	cytosol	22.08	20.88
KRH02818	Soybean	nucleus	24.8	20.81
KRH59380	Soybean	nucleus	23.36	19.86
KRH43215	Soybean	nucleus	23.52	19.84
KRH51633	Soybean	cytosol	20.8	19.58
KRH60958	Soybean	cytosol	20.64	19.49
KRH37304	Soybean	nucleus	23.68	19.35
KRH74089	Soybean	cytosol	23.84	19.03
KRG89850	Soybean	nucleus	23.68	18.88
KRH12287	Soybean	nucleus	23.2	18.76
KRH14028	Soybean	cytosol	21.44	18.28
KRH73448	Soybean	nucleus	22.88	18.26
KRH64648	Soybean	cytosol	24.16	18.04
KRH14687	Soybean	nucleus	22.4	17.88
KRH18693	Soybean	nucleus	22.88	17.76
KRH53256	Soybean	cytosol	23.68	17.58

Protein Annotations

EMBL:ACUP02000632	EnsemblPlants:KRH76635	EnsemblPlantsGene:GLYMA_01G164500	EntrezGene:102662030	InterPro:DUF630	InterPro:DUF632
ncoils:Coil	PANTHER:PTHR21450	PANTHER:PTHR21450:SF23	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH76635
ProteinID:KRH76635.1	SEG:seg	UniParc:UPI00023BEBAC	UniProt:I1J8J5	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:-:50206494..50210179

Molecular Weight (calculated)

70309.4 Da

IEP (calculated)

8.812

GRAVY (calculated)

-0.434

Length

625 amino acids

Sequence
(BLAST)

001: MGCCHSKIER EETVSRCKAR KRYMKQFVQA RHAFSAAHVM YIRSLRATGS ALFQFANAET TVLHHHLPSR PHPILPPPPP RTPTPMPPPP PPPMSPSSYT
101: WTSDTTSSPA LPQPPPPPPP PVASSAWDFW DPFMPVVASR LATEEEWEAT TTTGSEVVVM AAASVTAPPS VVSGFSKETP SELAMVVSRN STKDLVEVIK
201: ELDDYFLKAA DAGSHVSLLL EVPNSGFSDN SKACKVHSYG WSLSPSLWAW GSSPKLNGGA FGVNGVGSVG HCSTVERLYA WEKKLYQEVK NAKTIKMEHE
301: KKLALLRKVE MKRADYVKTE KTKKGVEKLE SQMMVASQAI DSTSAEIIKL REVELYPQLI ELVKGLMCMW RSMYECHQVQ KHIVQQLEYL NTIPSNNPTS
401: EIHRQSTLQL ELEVKQWHQS FCNLFKAHRD YIQSLTGWLR FTLFQFSKNP LSRTPEESKI YSLCEEWHLA VDRIPDKVAS EGIKSLLTVI HAIVVQQAEE
501: QKQKKRSDSA FKELEKKVVQ LRSLECKYGP YSMPESYGSM RTKDPVTEKR AKVDALRAKA EEEKSKYEKS VSVTRAMTLN NLQMGCPHVF QGIVGFSSVC
601: MEVFESVYNK AKAAEQEHDV KRILP

Best Arabidopsis Sequence Match ( AT3G51290.3 )
(BLAST)

001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEVKRLLP

Arabidopsis Description

Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.