Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH18693 | Soybean | nucleus | 91.2 | 88.82 |
KRH73448 | Soybean | nucleus | 71.05 | 71.14 |
KRH14687 | Soybean | nucleus | 70.54 | 70.63 |
VIT_06s0009g01600.t01 | Wine grape | nucleus | 37.5 | 62.42 |
AT2G27090.2 | Thale cress | nucleus | 55.36 | 58.41 |
CDY04477 | Canola | nucleus | 52.17 | 56.88 |
Bra012035.1-P | Field mustard | nucleus | 52.04 | 56.59 |
Solyc09g007100.2.1 | Tomato | nucleus | 54.34 | 55.76 |
PGSC0003DMT400005111 | Potato | nucleus | 54.59 | 55.66 |
CDX71474 | Canola | nucleus | 50.89 | 55.49 |
VIT_06s0009g01610.t01 | Wine grape | nucleus | 25.26 | 51.97 |
GSMUA_Achr9P05210_001 | Banana | nucleus | 37.88 | 45.98 |
GSMUA_Achr6P32100_001 | Banana | cytosol | 35.08 | 45.68 |
KXG39486 | Sorghum | nucleus | 44.52 | 42.05 |
TraesCS4A01G128000.1 | Wheat | cytosol | 43.49 | 41.84 |
TraesCS4D01G178500.1 | Wheat | cytosol | 43.24 | 41.7 |
TraesCS4B01G176800.1 | Wheat | cytosol | 42.98 | 41.45 |
HORVU4Hr1G052040.1 | Barley | cytosol | 43.49 | 41.03 |
Os03t0321500-01 | Rice | plasma membrane | 43.11 | 40.09 |
Zm00001d028960_P001 | Maize | nucleus | 43.11 | 38.28 |
TraesCS2A01G099100.1 | Wheat | nucleus | 25.26 | 36.46 |
Os07t0686500-01 | Rice | endoplasmic reticulum | 33.16 | 36.41 |
KRG97595 | Soybean | cytosol | 29.21 | 34.64 |
KRH43215 | Soybean | nucleus | 31.38 | 33.2 |
KRH59380 | Soybean | nucleus | 30.87 | 32.93 |
KRH28815 | Soybean | cytosol | 15.18 | 26.33 |
KRH19063 | Soybean | nucleus | 23.6 | 24.7 |
KRH02818 | Soybean | nucleus | 23.09 | 24.3 |
KRH76635 | Soybean | cytosol | 18.88 | 23.68 |
KRH37304 | Soybean | nucleus | 23.09 | 23.66 |
KRH12287 | Soybean | nucleus | 22.96 | 23.29 |
KRG90664 | Soybean | cytosol | 22.58 | 22.96 |
KRH36090 | Soybean | nucleus | 21.94 | 22.43 |
KRH74089 | Soybean | cytosol | 21.81 | 21.84 |
KRH60958 | Soybean | cytosol | 18.11 | 21.45 |
KRH51633 | Soybean | cytosol | 18.11 | 21.39 |
KRH14028 | Soybean | cytosol | 19.9 | 21.28 |
KRH53256 | Soybean | cytosol | 22.7 | 21.14 |
KRH64648 | Soybean | cytosol | 22.45 | 21.03 |
KRH09858 | Soybean | nucleus | 19.26 | 20.3 |
KRH23466 | Soybean | nucleus | 19.39 | 20.29 |
KRH12768 | Soybean | cytosol | 16.2 | 20.22 |
KRH62002 | Soybean | cytosol | 17.73 | 19.89 |
KRH52653 | Soybean | cytosol | 17.73 | 19.55 |
KRH37731 | Soybean | nucleus | 15.56 | 18.94 |
KRH01066 | Soybean | nucleus | 17.22 | 18.52 |
KRH40173 | Soybean | nucleus | 17.35 | 17.71 |
KRH08031 | Soybean | cytosol | 9.82 | 17.62 |
KRH66512 | Soybean | nucleus | 17.35 | 17.02 |
KRH28816 | Soybean | cytosol | 0.38 | 9.09 |
Protein Annotations
EMBL:ACUP02012295 | EnsemblPlants:KRG89850 | EnsemblPlantsGene:GLYMA_20G051100 | EntrezGene:100800818 | InterPro:DUF630 | InterPro:DUF632 |
ncoils:Coil | PFAM:PF04782 | PFAM:PF04783 | ProteinID:KRG89850 | ProteinID:KRG89850.1 | SEG:seg |
UniParc:UPI000233DC65 | UniProt:K7N1S1 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:11305660..11312484
Molecular Weight (calculated)
88448.6 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.696
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASSSKMDD DDKALQLCRE RKKFVKQALD GRCSFAASHV SYVQSLKSTG TALRKFLEPE APIESSLDTS TNATPEQPLD KTLSQFSLSS SVSRRTDAAE
101: TFSPTPSPPS SSKFQAHHMK FSSSSSKKVE EKPPVPIIGT VTSSGTPHNV VPHPTDKSAF EVSPLPVETP PWDFFGLFHP IDHQFSFQEG KVMHQDMVAN
201: ADDISRLREE EGIPELEDDE KVSSHEREDS TDSEDEFDDE PATDTLVQRF ENFNRVNDHI KPNDLSATDK HPKGDSASEV ELGNGEKGNS PVVSPLKTAS
301: TEVSLLTVID KSKEKENHRE KVVPKDFFSS MKDIEFLFVK ASESGKEVPK MLEANKSHFR PLFPAKENRL VAPSFLKACF SCGEDPSKLP EEPAQNSVKY
401: LTWHRTMSSR SYSSANPPGA NSKADVDDVT NNLFDNFCMI SGSHASTLDR LYAWERKLYD EVKASDLIRK EYDMKCKFLR NLESKGEKTS RIDKMRAVVK
501: DLHSRIRIAI LRIDSISKRI EELRDKELTP QLEELIDGLS RMWEVMFECH KLQFQTMSTV YNNSHAGIAA THSELRRQIT SYLESELHYL SSSFTKWIGA
601: QKFYLEAING WLHKCVSLKQ KPGKKKRPQR PLLRMYGPPI YATCEIWLEK LGELPVQDVV DSMKSLAGEI AQFLPRQEKN QGKGANHSHL TTWSANNIRS
701: ESSDNLLRDG TLEDWDSGFD QFRASFLGFL AQLNNFAGSS IMMYTDLRQA IQIAKKNYHH RSNSQAQDGQ WNSLSQDDNS MSQS
101: TFSPTPSPPS SSKFQAHHMK FSSSSSKKVE EKPPVPIIGT VTSSGTPHNV VPHPTDKSAF EVSPLPVETP PWDFFGLFHP IDHQFSFQEG KVMHQDMVAN
201: ADDISRLREE EGIPELEDDE KVSSHEREDS TDSEDEFDDE PATDTLVQRF ENFNRVNDHI KPNDLSATDK HPKGDSASEV ELGNGEKGNS PVVSPLKTAS
301: TEVSLLTVID KSKEKENHRE KVVPKDFFSS MKDIEFLFVK ASESGKEVPK MLEANKSHFR PLFPAKENRL VAPSFLKACF SCGEDPSKLP EEPAQNSVKY
401: LTWHRTMSSR SYSSANPPGA NSKADVDDVT NNLFDNFCMI SGSHASTLDR LYAWERKLYD EVKASDLIRK EYDMKCKFLR NLESKGEKTS RIDKMRAVVK
501: DLHSRIRIAI LRIDSISKRI EELRDKELTP QLEELIDGLS RMWEVMFECH KLQFQTMSTV YNNSHAGIAA THSELRRQIT SYLESELHYL SSSFTKWIGA
601: QKFYLEAING WLHKCVSLKQ KPGKKKRPQR PLLRMYGPPI YATCEIWLEK LGELPVQDVV DSMKSLAGEI AQFLPRQEKN QGKGANHSHL TTWSANNIRS
701: ESSDNLLRDG TLEDWDSGFD QFRASFLGFL AQLNNFAGSS IMMYTDLRQA IQIAKKNYHH RSNSQAQDGQ WNSLSQDDNS MSQS
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.