Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G176800.1 | Wheat | cytosol | 99.14 | 99.14 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 97.79 | 97.55 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 93.97 | 91.94 |
| KXG39486 | Sorghum | nucleus | 72.32 | 70.84 |
| Os03t0321500-01 | Rice | plasma membrane | 73.31 | 70.7 |
| Zm00001d028960_P001 | Maize | nucleus | 70.23 | 64.67 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 36.65 | 49.5 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 38.87 | 48.92 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 26.94 | 46.5 |
| KRG89850 | Soybean | nucleus | 41.7 | 43.24 |
| AT2G27090.2 | Thale cress | nucleus | 39.48 | 43.2 |
| CDY04477 | Canola | nucleus | 37.76 | 42.7 |
| KRH18693 | Soybean | nucleus | 42.19 | 42.61 |
| Bra012035.1-P | Field mustard | nucleus | 37.76 | 42.58 |
| KRH73448 | Soybean | nucleus | 40.71 | 42.27 |
| KRH14687 | Soybean | nucleus | 40.1 | 41.63 |
| CDX71474 | Canola | nucleus | 36.78 | 41.59 |
| Solyc09g007100.2.1 | Tomato | nucleus | 38.13 | 40.58 |
| PGSC0003DMT400005111 | Potato | nucleus | 38.13 | 40.31 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 18.7 | 39.9 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 28.17 | 31.16 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 23.62 | 27.0 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 18.45 | 22.56 |
| TraesCS5D01G340500.1 | Wheat | plastid | 20.42 | 22.46 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 16.11 | 20.7 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 18.94 | 19.97 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 13.41 | 19.39 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 16.11 | 19.35 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 15.62 | 18.17 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 17.71 | 17.78 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 15.87 | 17.74 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 19.68 | 17.68 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 16.11 | 17.17 |
| TraesCS3D01G509700.1 | Wheat | plastid | 19.07 | 16.85 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 15.62 | 16.73 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 16.61 | 16.67 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 19.43 | 16.39 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 17.84 | 16.15 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G178500.1 | EnsemblPlantsGene:TraesCS4D01G178500 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0009506 |
| GO:GO:0016020 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4D:+:309919249..309925425
Molecular Weight (calculated)
91497.8 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.643
Length
813 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTRATSED DKALVLCQER KRYVKEALDG RCAFAAAHFA YIQSLRHTGF ALRKFVEPEV PTDSSLYTST SATPEPPGMR HRSMNLSPSV SHPASDSFSP
101: APSPLSSGRF HVNHMKAGRN PARTVEEKVP VPVTATLETS SSVPIQTVHD LDDSSTFEAP PGTPPWDYFG LFQPVESQLS FHDEKESGHD FENADDIRRL
201: REKEGIPELE EELEKSHAHA GDVRLSQQEK TPDVRDGEQS TMSGREDDFA DSEDDFENPS SEPLVRMFKN RNDTPVENIV TDQSPAHLAA DKVVSKNLVD
301: KVALENIADK VALENIHSKT EEPKSDNKVL EPKSDNRVLD ISMYETDETP VTSPVKEVAS SVAAHPINGK SKEPFRDVRN GEKDLSTSMK EVEILFIKAS
401: DSGKEVPRML EADKVNFRPL LTEERARGLK APGFFATLFA CCREEVPVPQ PPPQADMKHL TWHRSVSSHS SSSRNPIGAA SKVDVDGLTG NIFSGVYMNS
501: GSHASTLDRL YAWERKLCDE VKASSTICRQ YDEKCRYLRN QESRGESQMS IDRTRAVVKD LYSRICVAIQ RIDMISKNIE DLRDKELQPQ LEELIGSLTR
601: MWETMLECHR HQHEIIKLVS NSGGIKVLIR SESQFQATLL LQVELKSLFS NFQRWIVSHR SYLNSLQSWL LKCVKSLRTK KKSRKKKDTN FQITNFAVAP
701: IFTICEQWIQ LLDELPIEDL EGGIKGLLAD INHCMPRQEK RRGGSRSTFA IANGGLNDEM RGIHRNAAHT DLQSSLESFL GKLEFFSDVS VHKYGELKKK
801: VNTAKEKYEQ QNK
101: APSPLSSGRF HVNHMKAGRN PARTVEEKVP VPVTATLETS SSVPIQTVHD LDDSSTFEAP PGTPPWDYFG LFQPVESQLS FHDEKESGHD FENADDIRRL
201: REKEGIPELE EELEKSHAHA GDVRLSQQEK TPDVRDGEQS TMSGREDDFA DSEDDFENPS SEPLVRMFKN RNDTPVENIV TDQSPAHLAA DKVVSKNLVD
301: KVALENIADK VALENIHSKT EEPKSDNKVL EPKSDNRVLD ISMYETDETP VTSPVKEVAS SVAAHPINGK SKEPFRDVRN GEKDLSTSMK EVEILFIKAS
401: DSGKEVPRML EADKVNFRPL LTEERARGLK APGFFATLFA CCREEVPVPQ PPPQADMKHL TWHRSVSSHS SSSRNPIGAA SKVDVDGLTG NIFSGVYMNS
501: GSHASTLDRL YAWERKLCDE VKASSTICRQ YDEKCRYLRN QESRGESQMS IDRTRAVVKD LYSRICVAIQ RIDMISKNIE DLRDKELQPQ LEELIGSLTR
601: MWETMLECHR HQHEIIKLVS NSGGIKVLIR SESQFQATLL LQVELKSLFS NFQRWIVSHR SYLNSLQSWL LKCVKSLRTK KKSRKKKDTN FQITNFAVAP
701: IFTICEQWIQ LLDELPIEDL EGGIKGLLAD INHCMPRQEK RRGGSRSTFA IANGGLNDEM RGIHRNAAHT DLQSSLESFL GKLEFFSDVS VHKYGELKKK
801: VNTAKEKYEQ QNK
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.