Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G218200.1 | Wheat | nucleus | 98.7 | 98.96 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 98.57 | 98.83 |
| Os10t0562700-01 | Rice | nucleus | 86.38 | 86.83 |
| Zm00001d029946_P003 | Maize | nucleus | 84.44 | 83.57 |
| EER94480 | Sorghum | nucleus | 84.7 | 83.18 |
| Zm00001d000039_P001 | Maize | nucleus | 82.88 | 81.82 |
| GSMUA_Achr11P... | Banana | nucleus | 61.74 | 65.84 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 57.98 | 63.86 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 60.83 | 63.72 |
| CDX83412 | Canola | nucleus | 48.38 | 55.42 |
| CDX71821 | Canola | nucleus | 50.84 | 55.21 |
| CDY41178 | Canola | nucleus | 51.36 | 54.92 |
| Bra007523.1-P | Field mustard | nucleus | 51.23 | 54.63 |
| CDY42691 | Canola | nucleus | 50.84 | 54.22 |
| CDY56992 | Canola | nucleus | 50.84 | 53.92 |
| KRH01066 | Soybean | nucleus | 50.97 | 53.91 |
| CDX95620 | Canola | nucleus | 47.21 | 52.37 |
| AT1G02110.1 | Thale cress | nucleus | 47.73 | 52.35 |
| Bra014497.1-P | Field mustard | nucleus | 51.36 | 51.97 |
| KRH40173 | Soybean | nucleus | 51.62 | 51.82 |
| AT3G60320.1 | Thale cress | nucleus | 52.01 | 50.38 |
| Bra000365.1-P | Field mustard | nucleus | 52.14 | 50.12 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 54.34 | 49.59 |
| PGSC0003DMT400066867 | Potato | nucleus | 53.31 | 48.24 |
| KRH66512 | Soybean | nucleus | 49.68 | 47.93 |
| Solyc01g090270.2.1 | Tomato | nucleus | 52.53 | 46.23 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 29.57 | 40.57 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 30.74 | 35.64 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 26.85 | 29.61 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 22.05 | 25.11 |
| TraesCS5D01G340500.1 | Wheat | plastid | 22.31 | 23.27 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 21.92 | 23.25 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 23.74 | 22.59 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 18.55 | 19.46 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 17.64 | 19.13 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 19.97 | 18.94 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 15.18 | 18.48 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 17.9 | 18.18 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 17.9 | 18.09 |
| TraesCS3D01G509700.1 | Wheat | plastid | 19.97 | 16.74 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 19.07 | 16.37 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 16.73 | 15.93 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 18.29 | 15.58 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 16.86 | 13.49 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G219800.1 | EnsemblPlantsGene:TraesCS1D01G219800 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF9 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:+:307459896..307463549
Molecular Weight (calculated)
86201.3 Da
IEP (calculated)
6.699
GRAVY (calculated)
-0.598
Length
771 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASKVEQ EDTVRRCKER RRNIKDAVAA RQLLASAHAD YLRSLRVTAA ALSRFAQGHS SLTVSHHTAP VLLTTAAPPA LHAPAPAAMS SVASFSLPPP
101: TPLPRHQPPP PPPQQQQPQQ PQPQAAAAAL RVDMDPRMRR LKVPHILSDS SVASSFRKPP VVGTPSSSSA WDWENFYPPS PPDSEFFDRR KTDLEEANRL
201: RELDDEAKAR GYPQRRHDHL KEEDEVDDSH GEDEEETERE DMHCGGWEDE EDHYASTTTS ETRSEEGEVG NRSECGFAAR SEYGGTAPSE YAAVPMQLRR
301: AERSEVGDSF STVTGATEMR MVVRHRTLSE IVAAIEEYFV KAADAGDSVS ELLEASRAQL DRNFQQLKKT VYHSNSVLSA LASTWTSKPP LAVRYKLDTN
401: SLEMGSMEGK SHGSTLERLL AWEKKLYEEV KARESVKIEH EKKLSTLQSL EYRGRDSAKL DKTKASINKL QSLIVVTSQA ATTTSSAIVS VRDNELAPQL
501: VELCFALLSM WRSMNYFHET QNEIVQQVRG LVDNSMAEST SDLHRLATRD LEAAVSAWHS NFNRLIKYQR EYIRSLYGWL KLTLFQVDSI TPQEAHASLI
601: SRELTTFCDE WKQALDRLPD AVASEAIKSF VNVIHVIYTK QAEEMKIKKR TETYSKELEK KTNSLRAIEK KYYQSYSLVG LGLPGSGRDG IEGHTFDARD
701: PLSEKKTEIA QCRRKVEDEI TRHAKAVEVT RSMTLNNIQT GLPGMFQAIA GFSGTVVEAL DVVCRRAGSV R
101: TPLPRHQPPP PPPQQQQPQQ PQPQAAAAAL RVDMDPRMRR LKVPHILSDS SVASSFRKPP VVGTPSSSSA WDWENFYPPS PPDSEFFDRR KTDLEEANRL
201: RELDDEAKAR GYPQRRHDHL KEEDEVDDSH GEDEEETERE DMHCGGWEDE EDHYASTTTS ETRSEEGEVG NRSECGFAAR SEYGGTAPSE YAAVPMQLRR
301: AERSEVGDSF STVTGATEMR MVVRHRTLSE IVAAIEEYFV KAADAGDSVS ELLEASRAQL DRNFQQLKKT VYHSNSVLSA LASTWTSKPP LAVRYKLDTN
401: SLEMGSMEGK SHGSTLERLL AWEKKLYEEV KARESVKIEH EKKLSTLQSL EYRGRDSAKL DKTKASINKL QSLIVVTSQA ATTTSSAIVS VRDNELAPQL
501: VELCFALLSM WRSMNYFHET QNEIVQQVRG LVDNSMAEST SDLHRLATRD LEAAVSAWHS NFNRLIKYQR EYIRSLYGWL KLTLFQVDSI TPQEAHASLI
601: SRELTTFCDE WKQALDRLPD AVASEAIKSF VNVIHVIYTK QAEEMKIKKR TETYSKELEK KTNSLRAIEK KYYQSYSLVG LGLPGSGRDG IEGHTFDARD
701: PLSEKKTEIA QCRRKVEDEI TRHAKAVEVT RSMTLNNIQT GLPGMFQAIA GFSGTVVEAL DVVCRRAGSV R
001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
Arabidopsis Description
NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.