Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 96.98 | 96.29 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 95.91 | 94.56 |
| HORVU6Hr1G062350.2 | Barley | plastid | 90.21 | 88.79 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 66.01 | 67.58 |
| Os02t0654600-00 | Rice | nucleus | 70.64 | 66.5 |
| KXG31098 | Sorghum | cytosol, plastid | 67.26 | 65.28 |
| Zm00001d051338_P002 | Maize | nucleus | 62.28 | 63.87 |
| CDX83412 | Canola | nucleus | 36.12 | 30.16 |
| KRH01066 | Soybean | nucleus | 38.43 | 29.63 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 40.57 | 29.57 |
| CDY56992 | Canola | nucleus | 37.72 | 29.16 |
| CDY42691 | Canola | nucleus | 37.01 | 28.77 |
| CDX95620 | Canola | nucleus | 35.41 | 28.63 |
| CDX71821 | Canola | nucleus | 35.94 | 28.45 |
| AT1G02110.1 | Thale cress | nucleus | 35.23 | 28.16 |
| CDY41178 | Canola | nucleus | 36.12 | 28.16 |
| Bra007523.1-P | Field mustard | nucleus | 36.12 | 28.08 |
| KRH40173 | Soybean | nucleus | 37.9 | 27.73 |
| Bra014497.1-P | Field mustard | nucleus | 37.37 | 27.56 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 39.86 | 26.51 |
| Bra000365.1-P | Field mustard | nucleus | 37.54 | 26.31 |
| AT3G60320.1 | Thale cress | nucleus | 36.65 | 25.88 |
| KRH66512 | Soybean | nucleus | 36.65 | 25.78 |
| PGSC0003DMT400066867 | Potato | nucleus | 37.9 | 25.0 |
| Solyc01g090270.2.1 | Tomato | nucleus | 36.48 | 23.4 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 27.05 | 22.86 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 24.56 | 19.74 |
| TraesCS5D01G340500.1 | Wheat | plastid | 24.38 | 18.54 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 20.64 | 17.13 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 24.38 | 16.91 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 21.53 | 16.64 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 18.15 | 16.11 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 20.28 | 15.51 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 18.68 | 14.77 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 19.22 | 14.15 |
| TraesCS3D01G509700.1 | Wheat | plastid | 22.95 | 14.02 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 21.71 | 13.59 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 19.39 | 13.46 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 19.39 | 13.41 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 17.97 | 13.31 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 20.28 | 12.6 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 19.93 | 11.62 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G225400.1 | EnsemblPlantsGene:TraesCS6D01G225400 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF11 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr6D:-:317080843..317082668
Molecular Weight (calculated)
61567.5 Da
IEP (calculated)
10.209
GRAVY (calculated)
-0.396
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAWSRQQG DAARAAAREH TRRCRERRRL MREAVRARRQ LAASHAGYLA SLGLVASALT HFALGEPLPV SDHTPPAVLV HRPAPAPSTP PPLLRSIQPA
101: QQDGAAAAEA PPAAAARTEG GVVGGEDLRV AVRHRSLAEV AAGLEEYFLR ASAAGDPVSK LLEASNAEYS GGRSSFFGVL CCMSSPSVSH DRIDSMHDRI
201: GKRHSSTLQQ LMVWEKKLYK EVKARERLQI HHDKKLAALR DQEYSRKVNV DIQKLKGAWD RARAQLATAS EAAHAGSAAI SELRDTHLAR QVLGLCHATR
301: DMWKAMRQHH EAQGLIAQQL RGLSGRTSMD ATTEIQHGAT RALEATMSAW CAALGHLAKH QRDYVAALHG WLKLTLAPSA DGAPASPVAA ELAAFVDRWR
401: QALDGVHCAE VLKSIKNFAG ATHALYAHQG DELRAARRVA QCTRELDRKS RMLRQVEKSH YDSYAPAGLA LWNRGRHWME HDMRQVHHAH NEVVQRKEEI
501: DACRRKLEGE MKRHAMAIDA TRSSAVAGVQ RTLPAVFQAM ATFSAALATA LDAVCRHGGY VQ
101: QQDGAAAAEA PPAAAARTEG GVVGGEDLRV AVRHRSLAEV AAGLEEYFLR ASAAGDPVSK LLEASNAEYS GGRSSFFGVL CCMSSPSVSH DRIDSMHDRI
201: GKRHSSTLQQ LMVWEKKLYK EVKARERLQI HHDKKLAALR DQEYSRKVNV DIQKLKGAWD RARAQLATAS EAAHAGSAAI SELRDTHLAR QVLGLCHATR
301: DMWKAMRQHH EAQGLIAQQL RGLSGRTSMD ATTEIQHGAT RALEATMSAW CAALGHLAKH QRDYVAALHG WLKLTLAPSA DGAPASPVAA ELAAFVDRWR
401: QALDGVHCAE VLKSIKNFAG ATHALYAHQG DELRAARRVA QCTRELDRKS RMLRQVEKSH YDSYAPAGLA LWNRGRHWME HDMRQVHHAH NEVVQRKEEI
501: DACRRKLEGE MKRHAMAIDA TRSSAVAGVQ RTLPAVFQAM ATFSAALATA LDAVCRHGGY VQ
001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN
Arabidopsis Description
BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.