Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83412 | Canola | nucleus | 83.79 | 99.85 |
| CDX95620 | Canola | nucleus | 84.41 | 97.41 |
| Bra007523.1-P | Field mustard | nucleus | 68.83 | 76.35 |
| Bra014497.1-P | Field mustard | nucleus | 71.57 | 75.33 |
| KRH01066 | Soybean | nucleus | 61.97 | 68.18 |
| KRH40173 | Soybean | nucleus | 63.72 | 66.54 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 65.59 | 62.25 |
| KRH66512 | Soybean | nucleus | 60.1 | 60.33 |
| PGSC0003DMT400066867 | Potato | nucleus | 63.84 | 60.09 |
| Solyc01g090270.2.1 | Tomato | nucleus | 62.72 | 57.42 |
| GSMUA_Achr11P... | Banana | nucleus | 51.25 | 56.85 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 47.76 | 54.71 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 49.63 | 54.08 |
| Os10t0562700-01 | Rice | nucleus | 50.75 | 53.06 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 50.0 | 52.15 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 50.0 | 52.15 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 50.12 | 52.14 |
| Zm00001d029946_P003 | Maize | nucleus | 50.12 | 51.6 |
| EER94480 | Sorghum | nucleus | 49.75 | 50.83 |
| Zm00001d000039_P001 | Maize | nucleus | 49.25 | 50.58 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 26.31 | 38.43 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 26.81 | 37.72 |
| HORVU6Hr1G062350.2 | Barley | plastid | 26.81 | 37.65 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 26.31 | 37.54 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 26.43 | 37.46 |
| Zm00001d051338_P002 | Maize | nucleus | 25.44 | 37.23 |
| Os02t0654600-00 | Rice | nucleus | 27.56 | 37.02 |
| KXG31098 | Sorghum | cytosol, plastid | 26.56 | 36.79 |
| Bra036821.1-P | Field mustard | nucleus | 28.43 | 35.62 |
| Bra022983.1-P | Field mustard | cytosol | 24.44 | 28.45 |
| Bra009853.1-P | Field mustard | nucleus | 22.32 | 24.35 |
| Bra018963.1-P | Field mustard | nucleus | 19.7 | 21.07 |
| Bra011166.1-P | Field mustard | nucleus | 16.96 | 20.51 |
| Bra012035.1-P | Field mustard | nucleus | 17.83 | 19.83 |
| Bra011832.1-P | Field mustard | nucleus | 15.84 | 18.49 |
| Bra002985.1-P | Field mustard | nucleus | 16.58 | 18.37 |
| Bra020807.1-P | Field mustard | nucleus | 17.33 | 18.22 |
| Bra011597.1-P | Field mustard | nucleus | 18.7 | 17.94 |
| Bra009665.1-P | Field mustard | cytosol | 15.71 | 17.82 |
| Bra015667.1-P | Field mustard | nucleus | 18.45 | 17.72 |
| Bra038839.1-P | Field mustard | nucleus | 16.83 | 17.18 |
| Bra038563.1-P | Field mustard | nucleus | 17.33 | 17.14 |
| Bra017947.1-P | Field mustard | nucleus | 18.7 | 16.36 |
| Bra025823.1-P | Field mustard | peroxisome | 16.71 | 11.67 |
Protein Annotations
Description
AT3G60320 (E=2e-295) | DNA binding
Coordinates
chrA03:-:10747310..10750545
Molecular Weight (calculated)
90526.5 Da
IEP (calculated)
6.926
GRAVY (calculated)
-0.780
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASKLDN EDTVRRCKDR RRLMTESVRA RHQLAAAHAD YCRSLRLTGS ALSSFAAGEP LAVSDQTPAV FLHTPSERSS SNFIPPSPSV YTPPPPAPPS
101: VASSNTKLPP IVTAPHSNRR RKQQQQQPKL PHILSSPSSS ERSNFMPTSF YPTAYQNSTY SATPSQASSV WNWENFYPPS PPDSEFFNRK SQERQHHNRF
201: GDQHDLHNRF SDTETERSEH DFFDSRKEKE FDTETERSSH SRKHKQFKTL DSAVEEEAER EEVQCSEWED HDHYSTTSSS EAAHEEDEEE EEDIESISEV
301: GTRSDFGSSV KTGSMRRQHA PMAQEYSGGG VGQEKYGKGD DAATSYSGRG DVSDMKMVVR HRDLKEIVDA IKENFDKAAE AGEQVSQMLN IGKAQLDRSF
401: SHLKKTVIHS SSVLSNLSST WTSKPPLEVK YRLDTTALEQ PGGPKSLCSS LDRLLAWEKK LYEEVKAREG FKIEHEKKLS KLQSQEYKGD NETKLDKTKG
501: SITRLQSLII VTSQAVSTTS TAIVRLRDTD LVPQLVELCH GFMYMWKAMH QFHEIQNNIV QQVQGLINRS GKGESTSELH RQATRDLETA VSLWHSSFCR
601: LIKFQREFIR SVQAWFKLTL LPVCHDENPG HKEPVDAYAF CDEWKLTLDR VPDTVASEAI KSFINVVHVI SAKQSEELKI KKRTESASKE LEKKASSLRN
701: IERKYYQSYS TVGFGLPDSG PDNGHGLDAR DPLTEKKLEL GACQRRVEEE MLKHSKAIEV TRAMTLNNLQ TGLPGVFQAL TSFSALFTES LQTVCTRSYS
801: IK
101: VASSNTKLPP IVTAPHSNRR RKQQQQQPKL PHILSSPSSS ERSNFMPTSF YPTAYQNSTY SATPSQASSV WNWENFYPPS PPDSEFFNRK SQERQHHNRF
201: GDQHDLHNRF SDTETERSEH DFFDSRKEKE FDTETERSSH SRKHKQFKTL DSAVEEEAER EEVQCSEWED HDHYSTTSSS EAAHEEDEEE EEDIESISEV
301: GTRSDFGSSV KTGSMRRQHA PMAQEYSGGG VGQEKYGKGD DAATSYSGRG DVSDMKMVVR HRDLKEIVDA IKENFDKAAE AGEQVSQMLN IGKAQLDRSF
401: SHLKKTVIHS SSVLSNLSST WTSKPPLEVK YRLDTTALEQ PGGPKSLCSS LDRLLAWEKK LYEEVKAREG FKIEHEKKLS KLQSQEYKGD NETKLDKTKG
501: SITRLQSLII VTSQAVSTTS TAIVRLRDTD LVPQLVELCH GFMYMWKAMH QFHEIQNNIV QQVQGLINRS GKGESTSELH RQATRDLETA VSLWHSSFCR
601: LIKFQREFIR SVQAWFKLTL LPVCHDENPG HKEPVDAYAF CDEWKLTLDR VPDTVASEAI KSFINVVHVI SAKQSEELKI KKRTESASKE LEKKASSLRN
701: IERKYYQSYS TVGFGLPDSG PDNGHGLDAR DPLTEKKLEL GACQRRVEEE MLKHSKAIEV TRAMTLNNLQ TGLPGVFQAL TSFSALFTES LQTVCTRSYS
801: IK
001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
Arabidopsis Description
NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.