Factsheet for Bra002985.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42454	Canola	cytosol	94.75	97.86
AT5G54480.1	Thale cress	nucleus	65.19	65.56
VIT_07s0031g02650.t01	Wine grape	cytosol	16.3	33.43
GSMUA_Achr3P22040_001	Banana	cytosol	25.69	27.11
Bra015667.1-P	Field mustard	nucleus	29.42	25.51
Bra017947.1-P	Field mustard	nucleus	29.83	23.56
GSMUA_Achr3P19020_001	Banana	cytosol	26.38	23.15
GSMUA_Achr9P08510_001	Banana	nucleus	25.0	23.15
Bra009665.1-P	Field mustard	cytosol	22.51	23.06
Bra020807.1-P	Field mustard	nucleus	24.17	22.94
Bra011597.1-P	Field mustard	nucleus	25.14	21.77
HORVU3Hr1G110830.5	Barley	cytosol, nucleus	20.03	20.86
Zm00001d011823_P002	Maize	plastid	25.55	20.6
TraesCS3A01G503100.1	Wheat	cytosol	20.86	20.41
Os01t0960200-00	Rice	nucleus	7.46	20.15
TraesCS1D01G265000.1	Wheat	nucleus	24.86	20.04
TraesCS1B01G275500.1	Wheat	nucleus	24.45	19.87
TraesCS1A01G264800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	24.45	19.84
TraesCS3D01G509700.1	Wheat	plastid	25.14	19.78
Zm00001d038223_P001	Maize	cytosol	24.72	19.74
EES19545	Sorghum	nucleus	24.59	19.73
TraesCS3B01G566500.1	Wheat	plastid	25.55	19.7
Bra011166.1-P	Field mustard	nucleus	17.82	19.46
Os05t0425000-00	Rice	nucleus	23.62	19.32
KXG34164	Sorghum	plastid	24.72	19.29
Bra036821.1-P	Field mustard	nucleus	16.57	18.75
Bra038839.1-P	Field mustard	nucleus	19.61	18.07
Bra038563.1-P	Field mustard	nucleus	20.17	18.0
Bra014497.1-P	Field mustard	nucleus	18.23	17.32
Bra007523.1-P	Field mustard	nucleus	17.27	17.29
Bra000365.1-P	Field mustard	nucleus	18.37	16.58
Bra011832.1-P	Field mustard	nucleus	15.33	16.16
Bra012035.1-P	Field mustard	nucleus	15.75	15.81
Bra009853.1-P	Field mustard	nucleus	14.78	14.56
Bra022983.1-P	Field mustard	cytosol	13.12	13.79
Bra018963.1-P	Field mustard	nucleus	12.71	12.27
Bra025823.1-P	Field mustard	peroxisome	17.82	11.24

Protein Annotations

EnsemblPlants:Bra002985.1	EnsemblPlants:Bra002985.1-P	EnsemblPlantsGene:Bra002985	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF8	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002543EC4
UniProt:M4CFK3	MapMan:35.2	:	:	:	:

Description

AT5G54480 (E=5e-209) | unknown protein

Coordinates

chrA10:+:6278212..6280386

Molecular Weight (calculated)

81645.1 Da

IEP (calculated)

4.780

GRAVY (calculated)

-0.636

Length

724 amino acids

Sequence
(BLAST)

001: MGIVASKADH NTPLLNLCRE RKELIRAARD ARYHLAKSHL LYFQSLLDFT NALNQFVHKD LIVIPYSDDD SSSGLECSGS SDSDSESDSD SNSHCLACDE
101: SQVVPLSKDD DQNPQKPSSG EDACGSSNNV HVEKSSEGVG FVEKAPVIAP VKCEKRVLET FPSSNQQNSF HGHDPFGLYD FLANTELVYT EPDQRYETES
201: DVWREIRERE GIPDLESDSD HSSLVRKKNV QESSSTAKDA GEVDKREVNI SDEENSSTAN VVGEVDKSDT EANTSNGKAD DVDETCTQEK QTSPETVTEV
301: TRSDEELSDE AYESSSSSFC SGSGHSDLRN VVEKINSISK KAASNSEVSD LLEVSKVIPH QPLGSQFKEL ASRLLGSSKS STRALLLRRG LPQDNLAVSL
401: SMTLEKLYVW EKKLHAEVTA EEKLRVLYEK GYSFLKSLDQ NGAEASEIYE AEAEVKLHLS KVNVSVRAVE TVSMRIHKIR DGELSPQVNK TINVFKEMWR
501: LLAKCHHKQF QAITRSKSCV HVVEKGSRKV TLKVEEQMRR FKESLRSYID AHRGFVRFLN EWLNRNIMEE DDQTKTDAPE IFRVCSEWLR EIVNVDEVKV
601: LSAVEEMELR FRGLGFKQLE EEKQRLRTER LCKELETKTK EVEESWGTQA EEVMGPELLS LRESATHETE KHEGLIREIN DAVSMSLQEC LVHVFEALEG
701: FCFGNFKAYQ NIRIVSTETE TLLL

Best Arabidopsis Sequence Match ( AT5G54480.1 )
(BLAST)

001: MGIVASKGDS NTPLLNLCKE RKELIKAARD ARYHLARSHL LYFKSLLDFS KALKQFLHKD LVVIPYSDDD SSSSDIICSG SDSDSDTDSD SDSDSDCIVC
101: DQPQTAPLSN NDDQSQRKPV VGDGTCGASN NGQEGMEKSR EGLGFEGTQF VSDPSEDEMK SSQHPYDILG FYKSVYNMQQ CEIIELDHRD DEVESDGFRE
201: IREREGIPDL EPESDYNSLI RKNKKKNKKK KKKKNVRESS SVASEIDKRD VEANTCNGQV ADETDNSNEA CAQETENTPE IVTEEVTRSD EEVEVVARSD
301: EEVSDEAYES SSSCFSESSG SGLTDLRKVV ERINSICGKA AGNSEVSELL EVSRVVYHQP LGSQFKGFAS RVIGSSGTTT RDLVLKRRFR LDDLAVSLSM
401: TLEKLYMWEK KLHAEVTAEE KLRVAYEKAY KILNNLDQNG AESSELYEAE TLVKLHLSKV NVSVRAVESI SMRIHKIRDE ELSFQVIEII NGFKTMWRFL
501: AKCHHKQFRV IARSKSCVHI VENGSSSRKA TQQVEKQIRR YRESLKGYID AHRGFVKLLN EWLNRIIMED DETETEAPEI FRVCSEWLRE IENVDTIKVL
601: SVVEEMRLRF QGLGFKQVEE EKQRMRTERL SKELEKKTKE LEEIRGTRGS SPTSNMVEPE LLFLRESVTQ ETEKHERLIR ELNDAVSMSL QECMVPVFEA
701: LGDFCFANFK AYQNIVIVTT

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9LSQ7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.