Factsheet for Bra011597.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75484	Canola	cytosol, plastid	77.27	92.68
Bra020807.1-P	Field mustard	nucleus	76.44	83.75
AT4G35240.1	Thale cress	nucleus	83.37	80.58
Bra009665.1-P	Field mustard	cytosol	57.66	68.18
KRH14028	Soybean	cytosol	50.0	57.03
KRH74089	Soybean	cytosol	51.91	55.43
VIT_03s0038g03260.t01	Wine grape	cytosol	50.36	51.85
Solyc10g074470.1.1	Tomato	cytosol	49.52	51.56
PGSC0003DMT400043330	Potato	mitochondrion	49.76	51.55
Solyc01g112050.2.1	Tomato	nucleus	50.96	47.87
PGSC0003DMT400048013	Potato	nucleus	51.32	46.99
Os02t0669900-01	Rice	cytosol	22.01	43.09
GSMUA_Achr3P14690_001	Banana	nucleus	35.17	41.76
GSMUA_Achr1P18120_001	Banana	cytosol	33.49	41.18
HORVU2Hr1G096140.2	Barley	cytosol	18.06	40.37
Os04t0562800-00	Rice	cytosol, mitochondrion	26.08	39.78
GSMUA_Achr7P04020_001	Banana	cytosol	33.25	39.71
GSMUA_Achr11P...	Banana	mitochondrion	31.46	39.14
OQU85656	Sorghum	cytosol	34.57	37.73
Zm00001d017553_P001	Maize	cytosol	33.97	37.72
TraesCS6B01G271800.1	Wheat	nucleus	33.73	37.01
TraesCS6D01G235200.1	Wheat	nucleus	33.73	36.96
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	29.07	36.87
HORVU6Hr1G064670.13	Barley	nucleus	33.49	36.84
TraesCS6A01G253600.1	Wheat	nucleus	33.61	36.83
HORVU7Hr1G057760.4	Barley	cytosol	27.87	35.57
EER97130	Sorghum	nucleus	38.76	35.49
TraesCS2D01G402400.1	Wheat	cytosol	32.18	35.44
Os09t0547300-01	Rice	nucleus	38.88	35.36
TraesCS2A01G405700.1	Wheat	cytosol	32.18	35.35
HORVU2Hr1G096180.1	Barley	cytosol	25.72	35.13
Os08t0551200-00	Rice	cytosol	33.97	35.06
TraesCS2B01G423500.1	Wheat	cytosol	32.06	34.99
TraesCS7D01G273600.1	Wheat	cytosol	33.49	34.57
Zm00001d006286_P001	Maize	nucleus	37.68	34.46
KXG26898	Sorghum	cytosol	32.54	34.3
Zm00001d002669_P002	Maize	cytosol	32.3	34.22
Zm00001d021452_P001	Maize	nucleus	38.28	34.01
TraesCS7B01G171500.1	Wheat	cytosol	32.18	33.71
Zm00001d026130_P001	Maize	nucleus	31.46	33.33
TraesCS5A01G347200.1	Wheat	nucleus	37.68	32.85
TraesCS5B01G348100.1	Wheat	nucleus	37.68	32.81
TraesCS5D01G353500.1	Wheat	nucleus	37.8	32.78
HORVU5Hr1G086500.2	Barley	nucleus	37.8	32.64
Bra015667.1-P	Field mustard	nucleus	31.94	31.98
Bra017947.1-P	Field mustard	nucleus	33.73	30.75
TraesCS7A01G273600.1	Wheat	cytosol, mitochondrion, nucleus	33.01	29.42
Bra011166.1-P	Field mustard	nucleus	20.33	25.64
Bra036821.1-P	Field mustard	nucleus	19.26	25.16
Bra002985.1-P	Field mustard	nucleus	21.77	25.14
Bra038563.1-P	Field mustard	nucleus	22.85	23.55
Bra011832.1-P	Field mustard	nucleus	19.14	23.29
Bra038839.1-P	Field mustard	nucleus	21.89	23.28
Bra012035.1-P	Field mustard	nucleus	18.9	21.91
Bra007523.1-P	Field mustard	nucleus	17.22	19.92
Bra022983.1-P	Field mustard	cytosol	16.27	19.74
Bra009853.1-P	Field mustard	nucleus	16.99	19.32
Bra014497.1-P	Field mustard	nucleus	17.34	19.03
Bra000365.1-P	Field mustard	nucleus	17.94	18.7
Bra018963.1-P	Field mustard	nucleus	15.67	17.47
Bra025823.1-P	Field mustard	peroxisome	23.33	16.99

Protein Annotations

EnsemblPlants:Bra011597.1	EnsemblPlants:Bra011597.1-P	EnsemblPlantsGene:Bra011597	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF2	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002547135
UniProt:M4D540	MapMan:35.1	:	:	:	:

Description

AT4G35240 (E=1e-178) | unknown protein

Coordinates

chrA01:+:1486674..1489387

Molecular Weight (calculated)

92698.2 Da

IEP (calculated)

6.117

GRAVY (calculated)

-0.773

Length

836 amino acids

Sequence
(BLAST)

001: MGCTSSKLDD LPAVALCRER CSFLDAAIQQ RNLLSESHVA YTNSLRGIGH SLHLFINHHH RFVASGGANG GGGDSPRLNL PPHRKGDPDE DKSPKKSKLP
101: SGSGSDSGHL EFDSDSDSNS DDDEEGHLDL DSDSLHHLSP QHHHFPIHEP YMDQQQQPGY NPYPYPNPEM MSHHNHQQQQ LPPPSYMHMN YMKNKSMPPS
201: VIYEQRPSSP QRVYEGESSS SSSYNPYPPN YFGYSNTGPG YYGSSSSSSG TTTKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL REEEGIPELE
301: EDDSHYEVVK EVHGRPKFAA AAAGVGGGGG NHQPPPAAVY REEVPSPSPP PVVDKSGAST SGGGDAAMYQ SRPSVSVEKK GVEYEVHVVE KKTVVEDAGN
401: EERRSNAAAP RGGGGPRAVH EVAKEIETQF VKAAESGSEI AKLLEVGKLP YGRKHVSKLL HPSLPLGGGS SAPAAAATAP PTYADIEEEL ASRSRNLSST
501: LHKLHLWEKK LYHEVKAEEK LRVAHEKKLR KLKRLDERGA EATKVDTTRK LVRDMSTKIR IAIQVVDKIS VTINKIRDED LWPQLNALIQ GLTTMWKTML
601: ECHQTQCQAI REARGLGPIR ASKKLGEEHL EATSLLGHEL INWILGFSNW VSAQKGYVRE LNKWLMKCLL YEPEETPDGI APFSPGRIGA PPIFVICNQW
701: SQALDRISEK EVIEAMRSFT TSVLQLWEQD RLETTTMGQG DSEKRGRNMD REEQRIHREI QALEKKMVLV APGDSLSLSG NVVYQSDTSN DSLQGSLQRI
801: FEAMERFTGE SVRAYDDLLV RAEEETAPRE VESDED

Best Arabidopsis Sequence Match ( AT4G35240.1 )
(BLAST)

001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEEILGF ARLRLGQKAP FRMMI

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.