Factsheet for Bra014497.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56992	Canola	nucleus	94.09	98.62
CDY42691	Canola	nucleus	89.24	94.05
AT3G60320.1	Thale cress	nucleus	83.73	80.15
Bra007523.1-P	Field mustard	nucleus	75.85	79.94
Bra000365.1-P	Field mustard	nucleus	75.33	71.57
KRH01066	Soybean	nucleus	63.91	66.8
KRH40173	Soybean	nucleus	64.83	64.32
VIT_15s0021g01550.t01	Wine grape	nucleus	64.44	58.11
KRH66512	Soybean	nucleus	60.24	57.45
PGSC0003DMT400066867	Potato	nucleus	63.12	56.46
GSMUA_Achr11P...	Banana	nucleus	52.76	55.6
Solyc01g090270.2.1	Tomato	nucleus	61.81	53.77
Os10t0562700-01	Rice	nucleus	52.76	52.41
GSMUA_Achr8P10940_001	Banana	nucleus	50.52	52.31
GSMUA_Achr4P21640_001	Banana	nucleus	47.51	51.71
TraesCS1B01G231600.1	Wheat	nucleus	51.84	51.37
TraesCS1D01G219800.1	Wheat	nucleus	51.97	51.36
TraesCS1A01G218200.1	Wheat	nucleus	51.71	51.24
Zm00001d029946_P003	Maize	nucleus	52.23	51.09
EER94480	Sorghum	nucleus	51.97	50.45
Zm00001d000039_P001	Maize	nucleus	51.57	50.32
Zm00001d017461_P001	Maize	cytosol, plastid	28.22	39.16
Zm00001d051338_P002	Maize	nucleus	27.17	37.77
KXG31098	Sorghum	cytosol, plastid	28.48	37.48
TraesCS6D01G225400.1	Wheat	cytosol, mitochondrion	27.56	37.37
TraesCS6A01G243100.1	Wheat	mitochondrion	27.69	37.28
TraesCS6B01G281100.1	Wheat	mitochondrion, plastid	27.69	37.02
HORVU6Hr1G062350.2	Barley	plastid	27.56	36.78
Os02t0654600-00	Rice	nucleus	28.74	36.68
Bra036821.1-P	Field mustard	nucleus	30.18	35.94
Bra022983.1-P	Field mustard	cytosol	24.15	26.71
Bra009853.1-P	Field mustard	nucleus	22.18	22.99
Bra011166.1-P	Field mustard	nucleus	17.19	19.76
Bra018963.1-P	Field mustard	nucleus	19.42	19.73
Bra012035.1-P	Field mustard	nucleus	18.24	19.28
Bra002985.1-P	Field mustard	nucleus	17.32	18.23
Bra020807.1-P	Field mustard	nucleus	17.98	17.96
Bra011832.1-P	Field mustard	nucleus	16.14	17.9
Bra009665.1-P	Field mustard	cytosol	16.27	17.54
Bra011597.1-P	Field mustard	nucleus	19.03	17.34
Bra038839.1-P	Field mustard	nucleus	17.59	17.05
Bra038563.1-P	Field mustard	nucleus	18.11	17.02
Bra015667.1-P	Field mustard	nucleus	18.37	16.77
Bra017947.1-P	Field mustard	nucleus	18.64	15.49
Bra025823.1-P	Field mustard	peroxisome	16.67	11.06

Protein Annotations

EnsemblPlants:Bra014497.1	EnsemblPlants:Bra014497.1-P	EnsemblPlantsGene:Bra014497	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF9	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002543DD6
UniProt:M4DDC9	MapMan:35.1	:	:	:	:

Description

AT3G60320 (E=6e-306) | DNA binding

Coordinates

chrA04:+:1037997..1040890

Molecular Weight (calculated)

86362.9 Da

IEP (calculated)

6.412

GRAVY (calculated)

-0.770

Length

762 amino acids

Sequence
(BLAST)

001: MGCAASKLDS EDTVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRLTGS ALSSFAAGEP LSVSDQTPSV FLNPPPQEQS PANHTPPRVT PLLKLKQAPP
101: ITSNRRRKQQ HKPKVPHILS DSSPPSSSPM SQRSNFYQNS TYSATPSHAS SVWNWENFYP PSPPDSEFFD KKAQERRQKQ KPDNNPFSHD TESEKSEYDF
201: FDSSMKKNKK QFESVNSTVD EEEAEEEETE TEREEVHCSE WDVHDHYSTT SSSEEEEDEE GDDNMESVSE VGTRNLMSHR HYHHQEPSPM PQEYGIGVGK
301: EIYHDKADDA TGGGEMEMEM VVRHRDLKEI ADSIKENFDK AAAAGDQVSQ MLELGRAQLD RSFGQLKKTV IHSSSLLSSL SSTWTSKPPL AVKYRLDTTA
401: LDQPNSVKSL CSTLDRLLAW EKKLYEEIKA REGVKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS LIIVTSQAVT TTSTAIISLR DTDLVPQLVE
501: LCHGFMYMWK AMHQYHETQN SIVEQVRGLI NRSSKGESTS ELHRQATRDL ESAVSSWHSS FTHVIKFQRD FIHSVHAWFK LTLLPVCHED AAVKEPTDAY
601: AFCDEWKLAL DRVPDTVASE AIKSFINVVH VISAKQADEH KIKKRTDSAS KELEKKASSL RNLERKYYQS YSMVGVGIPD SGPEHMLDAR DPLSDKKSEL
701: EVCRRRVEEE MVKHSKAIEV TRAMTLNNLQ TGLPGVFQAL TSFSALFMES LQTVCTRSYS IK

Best Arabidopsis Sequence Match ( AT3G60320.1 )
(BLAST)

001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK

Arabidopsis Description

NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.