Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G219800.1 | Wheat | nucleus | 98.83 | 98.57 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 98.44 | 98.44 |
| Os10t0562700-01 | Rice | nucleus | 86.74 | 86.96 |
| Zm00001d029946_P003 | Maize | nucleus | 84.53 | 83.44 |
| EER94480 | Sorghum | nucleus | 84.79 | 83.06 |
| Zm00001d000039_P001 | Maize | nucleus | 83.22 | 81.95 |
| GSMUA_Achr11P... | Banana | nucleus | 61.64 | 65.56 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 61.12 | 63.86 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 58.0 | 63.71 |
| CDX83412 | Canola | nucleus | 48.5 | 55.42 |
| CDX71821 | Canola | nucleus | 50.85 | 55.07 |
| CDY41178 | Canola | nucleus | 51.24 | 54.65 |
| Bra007523.1-P | Field mustard | nucleus | 51.11 | 54.36 |
| CDY42691 | Canola | nucleus | 50.85 | 54.08 |
| CDY56992 | Canola | nucleus | 50.98 | 53.92 |
| KRH01066 | Soybean | nucleus | 50.98 | 53.77 |
| CDX95620 | Canola | nucleus | 47.33 | 52.37 |
| AT1G02110.1 | Thale cress | nucleus | 47.72 | 52.2 |
| Bra014497.1-P | Field mustard | nucleus | 51.37 | 51.84 |
| KRH40173 | Soybean | nucleus | 51.63 | 51.69 |
| AT3G60320.1 | Thale cress | nucleus | 52.15 | 50.38 |
| Bra000365.1-P | Field mustard | nucleus | 52.15 | 50.0 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 54.36 | 49.47 |
| PGSC0003DMT400066867 | Potato | nucleus | 53.19 | 48.0 |
| KRH66512 | Soybean | nucleus | 49.8 | 47.93 |
| Solyc01g090270.2.1 | Tomato | nucleus | 52.41 | 46.0 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 29.65 | 40.0 |
| TraesCS5B01G330400.1 | Wheat | nucleus | 30.69 | 35.22 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 26.92 | 29.61 |
| TraesCS1B01G258100.1 | Wheat | nucleus | 24.32 | 23.61 |
| TraesCS5B01G335000.1 | Wheat | cytosol | 22.37 | 23.27 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 21.85 | 23.24 |
| TraesCS3B01G231600.1 | Wheat | cytosol | 23.8 | 22.34 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 20.03 | 18.94 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 15.08 | 18.53 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 18.34 | 18.5 |
| TraesCS5B01G193300.1 | Wheat | cytosol | 17.17 | 18.31 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 17.95 | 18.02 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 19.25 | 16.61 |
| TraesCS3B01G566500.1 | Wheat | plastid | 20.16 | 16.51 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 18.47 | 16.38 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 16.77 | 16.17 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 17.17 | 13.75 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G231600.1 | EnsemblPlantsGene:TraesCS1B01G231600 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF9 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1B:+:416125824..416129473
Molecular Weight (calculated)
85779.9 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.595
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASKVEQ EDTVRRCKER RRNIKDAVAA RQLLASAHAD YLRSLRITAA ALSRFAQGHS SLTVSHHTAP VLLTTAAPPA LHAPAPAATS SVASSSLPPP
101: TPLPRHQPPP PPPPQQQPQP QPQAAAAALR VDMDPRMRRL KVPHILSDSS VASSFRKPPV VGTPSSSSAW DWENFYPPSP PDSEFFDRRK TDLEEANRLR
201: ELDDEAKARG YPQRRHDHLK EEDEVDDSHG EDEETEREDM HCGGWEDEED HYASTTTSET RSEEGEVGNR SECGFAARSE YGGTAPSEYA AVPMQLRRAE
301: RSEVGDSFST VTGATEMRMV VRHRTLSEIV AAIEEYFVKA ADAGDNVSEL LEASRAQLDR NFQQLKKTVY HSNSVLSALA STWTSKPPLA VRYKLDTNSL
401: EMGSMEGKSH GSTLERLLAW EKKLYEEVKA RESVKIEHEK KLSTLQSLEY RGRGSAKLDK TKASINKLQS LIVVTSQAAT TTSSAIVSVR DNELAPQLVE
501: LCFALLSMWR SMNYFHETQN EIVQQVRGLV DNSMAESTSD LHRLATRDLE AAVSAWHSNF NRLIKYQREY IRSLYGWLKL TLFQVDSITP QEAHASLISR
601: ELTTFCDEWK QALDRLPDAV ASEAIKSFVN VIHVIYTKQA EEMKIKKRTE AYSKELEKKT NSLRAIEKKY YQSYSMVGLG LPGSGRDGIE GHSFDARDPL
701: SEKKTEIAQC RRKVEDEITR HAKAVEVTRS MTLNNIQTGL PGMFQAIAGF SGTVVEALDV VCRRAGSVR
101: TPLPRHQPPP PPPPQQQPQP QPQAAAAALR VDMDPRMRRL KVPHILSDSS VASSFRKPPV VGTPSSSSAW DWENFYPPSP PDSEFFDRRK TDLEEANRLR
201: ELDDEAKARG YPQRRHDHLK EEDEVDDSHG EDEETEREDM HCGGWEDEED HYASTTTSET RSEEGEVGNR SECGFAARSE YGGTAPSEYA AVPMQLRRAE
301: RSEVGDSFST VTGATEMRMV VRHRTLSEIV AAIEEYFVKA ADAGDNVSEL LEASRAQLDR NFQQLKKTVY HSNSVLSALA STWTSKPPLA VRYKLDTNSL
401: EMGSMEGKSH GSTLERLLAW EKKLYEEVKA RESVKIEHEK KLSTLQSLEY RGRGSAKLDK TKASINKLQS LIVVTSQAAT TTSSAIVSVR DNELAPQLVE
501: LCFALLSMWR SMNYFHETQN EIVQQVRGLV DNSMAESTSD LHRLATRDLE AAVSAWHSNF NRLIKYQREY IRSLYGWLKL TLFQVDSITP QEAHASLISR
601: ELTTFCDEWK QALDRLPDAV ASEAIKSFVN VIHVIYTKQA EEMKIKKRTE AYSKELEKKT NSLRAIEKKY YQSYSMVGLG LPGSGRDGIE GHSFDARDPL
701: SEKKTEIAQC RRKVEDEITR HAKAVEVTRS MTLNNIQTGL PGMFQAIAGF SGTVVEALDV VCRRAGSVR
001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
Arabidopsis Description
NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.