Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007523.1-P | Field mustard | nucleus | 99.03 | 98.76 |
| CDX71821 | Canola | nucleus | 92.23 | 93.66 |
| CDY56992 | Canola | nucleus | 80.03 | 79.37 |
| CDY42691 | Canola | nucleus | 78.64 | 78.42 |
| CDX83412 | Canola | nucleus | 70.18 | 75.19 |
| AT3G60320.1 | Thale cress | nucleus | 81.41 | 73.74 |
| CDX95620 | Canola | nucleus | 70.87 | 73.53 |
| KRH01066 | Soybean | nucleus | 64.08 | 63.37 |
| KRH40173 | Soybean | nucleus | 64.91 | 60.94 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 66.57 | 56.8 |
| KRH66512 | Soybean | nucleus | 62.27 | 56.2 |
| GSMUA_Achr11P... | Banana | nucleus | 55.48 | 55.33 |
| PGSC0003DMT400066867 | Potato | nucleus | 65.19 | 55.16 |
| Os10t0562700-01 | Rice | nucleus | 56.59 | 53.19 |
| Zm00001d029946_P003 | Maize | nucleus | 56.87 | 52.63 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 53.68 | 52.58 |
| Solyc01g090270.2.1 | Tomato | nucleus | 63.8 | 52.51 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 50.76 | 52.29 |
| EER94480 | Sorghum | nucleus | 56.59 | 51.97 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 54.92 | 51.36 |
| Zm00001d000039_P001 | Maize | nucleus | 55.62 | 51.34 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 54.65 | 51.24 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 54.65 | 51.24 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 28.43 | 36.22 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 28.16 | 36.12 |
| HORVU6Hr1G062350.2 | Barley | plastid | 28.57 | 36.08 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 27.46 | 36.07 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 28.43 | 35.96 |
| CDX77992 | Canola | nucleus | 31.07 | 35.61 |
| CDX73734 | Canola | nucleus | 31.48 | 35.47 |
| KXG31098 | Sorghum | cytosol, plastid | 28.29 | 35.23 |
| Os02t0654600-00 | Rice | nucleus | 29.13 | 35.18 |
| Zm00001d051338_P002 | Maize | nucleus | 26.63 | 35.04 |
| CDX79570 | Canola | cytosol | 27.05 | 28.3 |
| CDX87081 | Canola | nucleus | 20.94 | 28.28 |
| CDX84637 | Canola | cytosol | 26.07 | 28.02 |
| CDX80528 | Canola | nucleus | 23.72 | 23.33 |
| CDX88193 | Canola | nucleus | 23.72 | 23.2 |
| CDY28162 | Canola | cytosol | 12.62 | 22.52 |
| CDY66508 | Canola | cytosol, nucleus | 12.48 | 21.28 |
| CDX69386 | Canola | nucleus | 17.61 | 21.03 |
| CDY42005 | Canola | nucleus | 17.61 | 20.75 |
| CDY31475 | Canola | nucleus | 16.92 | 20.27 |
| CDY61085 | Canola | nucleus | 20.53 | 19.84 |
| CDY04477 | Canola | nucleus | 19.69 | 19.75 |
| CDY52975 | Canola | nucleus | 20.39 | 19.68 |
| CDX68628 | Canola | nucleus | 18.45 | 19.67 |
| CDX71474 | Canola | nucleus | 19.56 | 19.61 |
| CDX69122 | Canola | nucleus | 19.97 | 19.17 |
| CDY17530 | Canola | cytosol | 18.59 | 18.87 |
| CDX75484 | Canola | cytosol, plastid | 18.17 | 18.79 |
| CDY28161 | Canola | nucleus | 5.27 | 18.54 |
| CDX76322 | Canola | cytosol | 18.17 | 18.53 |
| CDY42454 | Canola | cytosol | 17.48 | 17.97 |
| CDY18335 | Canola | cytosol | 17.48 | 17.82 |
| CDY07877 | Canola | cytosol | 17.34 | 17.48 |
| CDX82615 | Canola | nucleus | 18.17 | 17.37 |
| CDY41788 | Canola | nucleus | 20.39 | 17.25 |
| CDX88008 | Canola | nucleus | 17.06 | 17.2 |
| CDY39136 | Canola | nucleus | 17.89 | 17.13 |
| CDX88372 | Canola | nucleus | 19.42 | 16.95 |
| CDY04672 | Canola | nucleus | 19.28 | 15.94 |
| CDY08177 | Canola | nucleus | 19.56 | 15.82 |
| CDY29526 | Canola | peroxisome | 18.03 | 11.31 |
| CDX87516 | Canola | nucleus | 6.8 | 10.89 |
Protein Annotations
| EnsemblPlants:CDY41178 | EnsemblPlantsGene:GSBRNA2T00072585001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF9 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY41178 | ProteinID:CDY41178.1 | SEG:seg |
| UniParc:UPI0004EF3327 | UniProt:A0A078HWN6 | MapMan:35.1 | : | : | : |
Description
BnaA09g38370DBnaA09g38370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWN6]
Coordinates
chrLK032492:+:202481..205166
Molecular Weight (calculated)
81092.0 Da
IEP (calculated)
7.553
GRAVY (calculated)
-0.726
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTASKLDG EDTVRRYKTR RRLMKEAVYA RHSLAAAQAD YCRSLRLTGS ALSSFAAGEP LSVSYQTPAV FLHHPPPSQP SPTNSIPPPP PPPQPPVISA
101: SSSRRRRQQQ HQQRPKLPHI LSDSSPSSSP VSERSNFYPR AYQNSTYSAT PSHASSVWNW ENFYPPSPPD SEFFDKKAQE EMLKQRETEH ASKMKKNSVV
201: DEEETEREEV QCGSWDVQDH YSTTSSSSEE EEDDNMESVS EVGTKVRASK RHNQQASPMP REYADDKADD ATTFSGSYRG GGGDVAVRHR DLKEIADAIK
301: EYFDKAAAAG DQVSQMLELG RAQLDGSFRQ LKKTVIHSSS ILSNLSSTWT SKPPLAVKYR LDTTALDQPN SLKSLCSTLD RLLAWEKKLY EEIKAREGVK
401: IEHEKKLSQL QSQEYKGEDA AKLDKTKASI NRLQSLIIVT SEAVTTTSTA IIRLRDTDLV PQLVELCHGF MYMWKAMHQF HETQNSIVQQ VKGLIDRSGK
501: GESTSELHRQ ATRDLESAVS SWHSSFSHLI EFQRDFIRSV HAWFKLTILN KDPTDAYSFC EEWKLALDRV PDTVASEAIK SFINVVHVIS TKQGDEHKVK
601: KRTETASKEL EKKASSLRSL ERKYYQSYSM VGVGLPESGP DSQHVLDARD PLREKKTELA GCQRRVEEEM VKHSKEVEVT RAMTLNNLQT GLPGVFQALT
701: SFSGLFVESL ETVCTRSHSI K
101: SSSRRRRQQQ HQQRPKLPHI LSDSSPSSSP VSERSNFYPR AYQNSTYSAT PSHASSVWNW ENFYPPSPPD SEFFDKKAQE EMLKQRETEH ASKMKKNSVV
201: DEEETEREEV QCGSWDVQDH YSTTSSSSEE EEDDNMESVS EVGTKVRASK RHNQQASPMP REYADDKADD ATTFSGSYRG GGGDVAVRHR DLKEIADAIK
301: EYFDKAAAAG DQVSQMLELG RAQLDGSFRQ LKKTVIHSSS ILSNLSSTWT SKPPLAVKYR LDTTALDQPN SLKSLCSTLD RLLAWEKKLY EEIKAREGVK
401: IEHEKKLSQL QSQEYKGEDA AKLDKTKASI NRLQSLIIVT SEAVTTTSTA IIRLRDTDLV PQLVELCHGF MYMWKAMHQF HETQNSIVQQ VKGLIDRSGK
501: GESTSELHRQ ATRDLESAVS SWHSSFSHLI EFQRDFIRSV HAWFKLTILN KDPTDAYSFC EEWKLALDRV PDTVASEAIK SFINVVHVIS TKQGDEHKVK
601: KRTETASKEL EKKASSLRSL ERKYYQSYSM VGVGLPESGP DSQHVLDARD PLREKKTELA GCQRRVEEEM VKHSKEVEVT RAMTLNNLQT GLPGVFQALT
701: SFSGLFVESL ETVCTRSHSI K
001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
Arabidopsis Description
NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.