CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84637	Canola	cytosol	93.32	95.83
AT2G34670.2	Thale cress	nucleus	87.23	86.6
VIT_10s0003g04480.t01	Wine grape	nucleus	53.7	56.75
KRH12768	Soybean	cytosol	40.93	44.9
KRH37731	Soybean	nucleus	40.93	43.79
GSMUA_Achr5P00570_001	Banana	cytosol	41.36	42.66
GSMUA_Achr9P30410_001	Banana	cytosol	36.87	41.3
Os01t0585600-01	Rice	nucleus	35.85	36.06
TraesCS3D01G213000.1	Wheat	nucleus	35.7	35.19
HORVU3Hr1G050880.1	Barley	nucleus	35.41	35.06
TraesCS3B01G240800.1	Wheat	nucleus	35.56	35.05
Zm00001d011231_P001	Maize	nucleus	34.4	34.9
TraesCS3A01G210200.1	Wheat	nucleus	35.12	34.72
EES00973	Sorghum	nucleus	34.4	33.76
Zm00001d044312_P001	Maize	nucleus	34.25	33.67
CDX77992	Canola	nucleus	29.46	32.27
CDX73734	Canola	nucleus	29.9	32.19
CDX83412	Canola	nucleus	27.72	28.38
CDY41178	Canola	nucleus	28.3	27.05
CDX71821	Canola	nucleus	27.87	27.04
CDX95620	Canola	nucleus	26.27	26.04
CDY42691	Canola	nucleus	27.14	25.86
CDY56992	Canola	nucleus	26.85	25.45
CDX87081	Canola	nucleus	19.45	25.09
CDX80528	Canola	nucleus	22.64	21.28
CDX88193	Canola	nucleus	22.64	21.17
CDX69386	Canola	nucleus	18.14	20.7
CDY28161	Canola	nucleus	6.1	20.49
CDY42005	Canola	nucleus	17.85	20.1
CDY31475	Canola	nucleus	16.98	19.44
CDY28162	Canola	cytosol	11.32	19.31
CDY61085	Canola	nucleus	20.61	19.03
CDY66508	Canola	cytosol, nucleus	11.61	18.91
CDY52975	Canola	nucleus	20.46	18.88
CDX68628	Canola	nucleus	17.85	18.2
CDX88372	Canola	nucleus	21.48	17.92
CDY41788	Canola	nucleus	21.92	17.72
CDX76322	Canola	cytosol	17.85	17.4
CDY17530	Canola	cytosol	17.85	17.32
CDY04672	Canola	nucleus	21.34	16.86
CDX82615	Canola	nucleus	18.43	16.84
CDY08177	Canola	nucleus	21.77	16.84
CDX75484	Canola	cytosol, plastid	16.98	16.79
CDX69122	Canola	nucleus	18.29	16.78
CDY39136	Canola	nucleus	18.29	16.73
CDY04477	Canola	nucleus	17.42	16.69
CDX71474	Canola	nucleus	17.42	16.69
CDY07877	Canola	cytosol	17.13	16.5
CDX88008	Canola	nucleus	16.84	16.22
CDX87516	Canola	nucleus	9.0	13.78
CDY42454	Canola	cytosol	13.79	13.55
CDY18335	Canola	cytosol	13.35	13.01
CDY29526	Canola	peroxisome	17.42	10.44

Protein Annotations

EnsemblPlants:CDX79570	EnsemblPlantsGene:GSBRNA2T00132331001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF21	PFAM:PF04782	PFAM:PF04783	ProteinID:CDX79570	ProteinID:CDX79570.1	SEG:seg
UniParc:UPI0004EEA250	MapMan:35.1	:	:	:	:

Description

BnaC03g19060D

Coordinates

chrLK031818:-:853046..855795

Molecular Weight (calculated)

78077.2 Da

IEP (calculated)

5.296

GRAVY (calculated)

-0.671

Length

689 amino acids

Sequence
(BLAST)

001: MGCAASSIDN EEKVLVCRQR KRLMKKLLVF RGDFADAQLA YLRALRNTGV TLRQFTESES LELENTSYGL SFPSPPPTLP PSPPHPPTLP PPPPPPPFSP
101: DLRKPEADEE EEGAAEIDGN VDGSVATPPP PLPNSWNLWN PFESLELDSH PNGDDVGTQT DLKKKQKFQQ AEEENWAETK TEFEEEDEQQ EALGLSVQRI
201: EAGGGSEVKK PRRLTFKLEE VMDDNSSMTS CYGKDLENAD CRIRRTLEGI IRELDDYFLK ASGCEKEIAV IVDINSRDSV DPFRYQETRR KRSSSAKVFS
301: ALSWSWSSKS LQMGKDATTS GTVEPCRPGA HCSTLEKLYT AEKKLYQLVR NKEIAKVEHE RKSALLQKQD GEAYDLSKIE KTRLSLESLE SEFQRLEDSI
401: TETCSCVLNL INEELYPQLV ALTSGLAHMW KTMLKCHQVQ VHISQQLNHL PDYPSIDLSS EYKRQAVNQL ETEVTSWYNS FCKLVNSQRE YVKTLCTWIQ
501: LTDRLSKEDN QRTSLPVAAR KLCKEWQLVF EKLPDQVTSE AIKSFLTAIK SVINQQTEEY NLRRKWNKLE KRLEKELISL AEMERRLEGM SAMEEDANST
601: SLGSKHPLLI KQAKIEALRK RVDVEKTKYL NSVEVSKRMT LDNLKSSLPN VFQVLTALAT VFAKGFESVH GQTATDVSNT SQDSDGSQH

Best Arabidopsis Sequence Match ( AT2G34670.2 )
(BLAST)

001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.