CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42454	Canola	cytosol	93.64	94.44
AT5G54480.1	Thale cress	nucleus	67.47	66.25
VIT_07s0031g02650.t01	Wine grape	cytosol	16.41	32.86
GSMUA_Achr3P22040_001	Banana	cytosol	26.03	26.82
CDX88372	Canola	nucleus	29.56	25.3
CDY41788	Canola	nucleus	29.99	24.88
CDY04672	Canola	nucleus	29.42	23.85
CDY17530	Canola	cytosol	23.76	23.66
CDX76322	Canola	cytosol	23.62	23.62
CDY08177	Canola	nucleus	29.28	23.23
CDX88008	Canola	nucleus	23.2	22.94
GSMUA_Achr9P08510_001	Banana	nucleus	25.04	22.63
GSMUA_Achr3P19020_001	Banana	cytosol	26.31	22.55
CDY07877	Canola	cytosol	22.77	22.52
CDX87516	Canola	nucleus	14.14	22.22
CDX75484	Canola	cytosol, plastid	21.78	22.09
CDX69122	Canola	nucleus	23.34	21.97
CDY28161	Canola	nucleus	6.36	21.95
CDY31475	Canola	nucleus	17.82	20.93
HORVU3Hr1G110830.5	Barley	cytosol, nucleus	20.37	20.72
Zm00001d011823_P002	Maize	plastid	25.88	20.38
TraesCS3A01G503100.1	Wheat	cytosol	21.22	20.27
Os01t0960200-00	Rice	nucleus	7.64	20.15
TraesCS1D01G265000.1	Wheat	nucleus	25.04	19.71
CDY66508	Canola	cytosol, nucleus	11.74	19.62
TraesCS3D01G509700.1	Wheat	plastid	25.46	19.57
CDY28162	Canola	cytosol	11.17	19.55
TraesCS1B01G275500.1	Wheat	nucleus	24.61	19.53
TraesCS1A01G264800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	24.61	19.51
TraesCS3B01G566500.1	Wheat	plastid	25.88	19.49
EES19545	Sorghum	nucleus	24.75	19.4
Zm00001d038223_P001	Maize	cytosol	24.75	19.29
CDX83412	Canola	nucleus	18.25	19.17
KXG34164	Sorghum	plastid	25.04	19.07
CDX77992	Canola	nucleus	16.83	18.92
Os05t0425000-00	Rice	nucleus	23.62	18.87
CDX73734	Canola	nucleus	16.83	18.59
CDX82615	Canola	nucleus	19.8	18.57
CDX68628	Canola	nucleus	17.68	18.49
CDX95620	Canola	nucleus	18.1	18.42
CDY39136	Canola	nucleus	19.52	18.33
CDY42691	Canola	nucleus	18.53	18.12
CDX69386	Canola	nucleus	15.42	18.05
CDX71821	Canola	nucleus	17.96	17.89
CDY56992	Canola	nucleus	18.39	17.88
CDY42005	Canola	nucleus	15.13	17.48
CDY41178	Canola	nucleus	17.82	17.48
CDX87081	Canola	nucleus	12.45	16.48
CDY04477	Canola	nucleus	15.98	15.72
CDX71474	Canola	nucleus	15.84	15.58
CDX88193	Canola	nucleus	14.71	14.11
CDX80528	Canola	nucleus	14.43	13.92
CDX79570	Canola	cytosol	13.01	13.35
CDX84637	Canola	cytosol	12.59	13.26
CDY61085	Canola	nucleus	13.44	12.73
CDY52975	Canola	nucleus	13.15	12.45
CDY29526	Canola	peroxisome	17.96	11.05

Protein Annotations

EnsemblPlants:CDY18335	EnsemblPlantsGene:GSBRNA2T00002923001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF8	PFAM:PF04782	PFAM:PF04783	ProteinID:CDY18335	ProteinID:CDY18335.1	SEG:seg
UniParc:UPI0004EF3EFB	UniProt:A0A078FV55	MapMan:35.1	:	:	:

Description

BnaC09g30850DBnaC09g30850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV55]

Coordinates

chrLK032084:+:519760..521949

Molecular Weight (calculated)

79772.1 Da

IEP (calculated)

4.724

GRAVY (calculated)

-0.600

Length

707 amino acids

Sequence
(BLAST)

001: MGIVGSKADH NTPLLNLCKE RKELIRAARD ARYHLAKSHL LYFQSLLDFT NALNQFVHKD LIVIPYSDDD SSSELVCSGS SDSDSESDSD SNSHCLACDE
101: SQAVPLSKDD DQNPQKPSSG EQACGSSNNV QEGIEKSSEG VGLVEKVPVI APVEDEKRNS FHGHDLFGLY DFLANTELVY TEPDQRYETE SDVWREIRER
201: EGIPDLESDS DHNGLVRKKN VQESSSTVNI SDEENSSTAN VVGEVDKSDT EANTSNGKAD DVDETCTQEK QTSPETATEV TRSDEELSDE AYESSSSSSS
301: FCSGSGHTDL RNVVEKINSI SKKAASSSEV SDLLEVSKVI PHQPLGSQFK ELASRLLGSS KSSTRALLLR RGLPQDNLAV SLSMTLEKLY VWEKKLHAEV
401: TAEEKLRVLY EKGYSFLKSL DQSGAEPSEI YEAEAEVKLH LSKVNVSVRA VETVSMRIHK IRDGELSFQV NKIINVFKEM WRFLAKCHHK QFQAITRSKS
501: CVHVVEKGSR KVTQKVEEQM RRFKESLRSY IDAHRGFVRF LNEWLNRNIM EEDDQTKTEA PEIFRVCSEW LREIVNVDEV KVLSAVEEME LRFRGLGFKQ
601: LEEEKVRLRT ERLCKELETK TKEVEESWGA QVEEVMGPEL LSLRESATHE TEKHEGLIRE INDAVSMTLQ ECLVHVFEAL EGFCFGNFKA YQNIRIVSTE
701: TETMLLC

Best Arabidopsis Sequence Match ( AT5G54480.1 )
(BLAST)

001: MGIVASKGDS NTPLLNLCKE RKELIKAARD ARYHLARSHL LYFKSLLDFS KALKQFLHKD LVVIPYSDDD SSSSDIICSG SDSDSDTDSD SDSDSDCIVC
101: DQPQTAPLSN NDDQSQRKPV VGDGTCGASN NGQEGMEKSR EGLGFEGTQF VSDPSEDEMK SSQHPYDILG FYKSVYNMQQ CEIIELDHRD DEVESDGFRE
201: IREREGIPDL EPESDYNSLI RKNKKKNKKK KKKKNVRESS SVASEIDKRD VEANTCNGQV ADETDNSNEA CAQETENTPE IVTEEVTRSD EEVEVVARSD
301: EEVSDEAYES SSSCFSESSG SGLTDLRKVV ERINSICGKA AGNSEVSELL EVSRVVYHQP LGSQFKGFAS RVIGSSGTTT RDLVLKRRFR LDDLAVSLSM
401: TLEKLYMWEK KLHAEVTAEE KLRVAYEKAY KILNNLDQNG AESSELYEAE TLVKLHLSKV NVSVRAVESI SMRIHKIRDE ELSFQVIEII NGFKTMWRFL
501: AKCHHKQFRV IARSKSCVHI VENGSSSRKA TQQVEKQIRR YRESLKGYID AHRGFVKLLN EWLNRIIMED DETETEAPEI FRVCSEWLRE IENVDTIKVL
601: SVVEEMRLRF QGLGFKQVEE EKQRMRTERL SKELEKKTKE LEEIRGTRGS SPTSNMVEPE LLFLRESVTQ ETEKHERLIR ELNDAVSMSL QECMVPVFEA
701: LGDFCFANFK AYQNIVIVTT

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9LSQ7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.